RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 LENG1Q96BZ8 264 aaPredicted RBP24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 POMPQ9Y244 141 aa24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 TIMM13Q9Y5L4 95 aaPredicted RBP24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 NUP205Q92621 2012 aa24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 PAPOLAP51003 745 aaKnown RBP24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 TBCCQ15814 346 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 STRADAQ7RTN6 431 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 NT5DC4Q86YG4 428 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 VANGL2Q9ULK5 521 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 LTBP3Q9NS15 1303 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 TXNDC9O14530 226 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 SMPD1P17405 629 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 MPSTP25325 297 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 PTPN3P26045 913 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 TMCO4Q5TGY1 634 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 USP33Q8TEY7 942 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 LENG8Q96PV6 779 aaPredicted RBP24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 ADAMTS10Q9H324 1103 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 MROH8Q9H579 483 aa24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 IARS2Q9NSE4 1012 aaKnown RBP24.94■■□□□ 1.58
SPTSSA-201ENST00000298130 TK2O00142 265 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 PHGDHO43175 533 aaKnown RBP24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 RAG1P15918 1043 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 CRABP2P29373 138 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 PDK1Q15118 436 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 TRIP10Q15642 601 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 ANKRD13AQ8IZ07 590 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 GBP5Q96PP8 586 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 MED10Q9BTT4 135 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 HACD1B0YJ81 288 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 MX2P20592 715 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 EPHA3P29320 983 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 DCAF4L1Q3SXM0 396 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 FAM219BQ5XKK7 198 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 CRYBG2Q8N1P7 616 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 LRRC52Q8N7C0 313 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 B3GALNT2Q8NCR0 500 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 GDPD5Q8WTR4 605 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 CELF6Q96J87 481 aaKnown RBP24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 KCNK16Q96T55 309 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 RBBP8Q99708 897 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 LRRC4Q9HBW1 653 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 SLC39A10Q9ULF5 831 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 BRCA2P51587 3418 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 ZNF487B1APH4 448 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 G3V2L1 256 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 C2P06681 752 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 DLG1Q12959 904 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 OR6Y1Q8NGX8 325 aa24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 C20orf96Q9NUD7 363 aaPredicted RBP24.93■■□□□ 1.58
SPTSSA-201ENST00000298130 CXCL11O14625 94 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 SNAI1O95863 264 aaPredicted RBP24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 FESP07332 822 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 COX4I1P13073 169 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 ETS2P15036 469 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 GJA5P36382 358 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 CDK18Q07002 472 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 ZBTB17Q13105 803 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 MSLNQ13421 630 aaPredicted RBP24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 ZNF460Q14592 562 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 TMEM198Q66K66 360 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 CYS1Q717R9 158 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 ARRDC4Q8NCT1 418 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 EDEM1Q92611 657 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 PIRO00625 290 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 GRK2P25098 689 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 GLUD2P49448 558 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 PRAMEF19Q5SWL8 479 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 KIAA0319Q5VV43 1072 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 TDRD5Q8NAT2 981 aaKnown RBP24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 DNAJB3Q8WWF6 145 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 CDCA5Q96FF9 252 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 DNAJC28Q9NX36 388 aa24.92■■□□□ 1.58
SPTSSA-201ENST00000298130 ZCWPW2A0A1B0GU75 182 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 YJEFN3A6XGL0 299 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 TKTL1P51854 596 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 WSCD1Q658N2 575 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 PAQR9Q6ZVX9 377 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 SIX6OS1Q8N1H7 587 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 ZFP42Q96MM3 310 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 CPNE1Q99829 537 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 GATA5Q9BWX5 397 aaPredicted RBP24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 PLEKHA5Q9HAU0 1116 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 GPAMQ9HCL2 828 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 HUS1O60921 280 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 GPR32O75388 356 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 CD68P34810 354 aaPredicted RBP24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 GARSP41250 739 aaKnown RBP24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 HARS2P49590 506 aaKnown RBP24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 KLF10Q13118 480 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 ANKRD20A4Q4UJ75 823 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 NOTUMQ6P988 496 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 AEBP2Q6ZN18 517 aaPredicted RBP24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 GPRIN1Q7Z2K8 1008 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 MLPHQ9BV36 600 aaPredicted RBP24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 CDH19Q9H159 772 aa24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 DDX43Q9NXZ2 648 aaKnown RBP24.91■■□□□ 1.58
SPTSSA-201ENST00000298130 GTF2IRD1Q9UHL9 959 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms