RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ITGA11Q9UKX5 1188 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
SPIDR-201ENST00000297423 AP4S1Q9Y587 144 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 APOL1O14791 398 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 ZBTB14O43829 449 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 PEX10O60683 326 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 AOC1P19801 751 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 PLCL1Q15111 1095 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 RAB6CQ53S08 254 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 HEATR6Q6AI08 1181 aaKnown RBP15.18■□□□□ 0.02
SPIDR-201ENST00000297423 BBS12Q6ZW61 710 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 TMC2Q8TDI7 906 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 COX4I2Q96KJ9 171 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 ZMAT2Q96NC0 199 aaKnown RBP15.18■□□□□ 0.02
SPIDR-201ENST00000297423 RAB6CQ9H0N0 254 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 JPH1Q9HDC5 661 aaPredicted RBP15.18■□□□□ 0.02
SPIDR-201ENST00000297423 XPNPEP3Q9NQH7 507 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 GID8Q9NWU2 228 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 FBP2O00757 339 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 CCNT2O60583 730 aaKnown RBP15.18■□□□□ 0.02
SPIDR-201ENST00000297423 FAM163BP0C2L3 166 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 TBXAS1P24557 533 aaPredicted RBP15.18■□□□□ 0.02
SPIDR-201ENST00000297423 MGAT1P26572 445 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 TMEM214Q6NUQ4 689 aaKnown RBP15.18■□□□□ 0.02
SPIDR-201ENST00000297423 LBX2Q6XYB7 198 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 UPF3AQ9H1J1 476 aaKnown RBP15.18■□□□□ 0.02
SPIDR-201ENST00000297423 PCDH18Q9HCL0 1135 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 APOC4-APOC2K7ER74 178 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 PDLIM1O00151 329 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 APOC2P02655 101 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 CHRNGP07510 517 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 ADORA2AP29274 412 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 NAGLUP54802 743 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 BFSP2Q13515 415 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 KDELC2Q7Z4H8 507 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 ADGRF2Q8IZF7 708 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 RIN3Q8TB24 985 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 CCDC138Q96M89 665 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 APBA2Q99767 749 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 RSAD1Q9HA92 442 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 CYP4F12Q9HCS2 524 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 ASNSD1Q9NWL6 643 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 ZNF229Q9UJW7 825 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 POLIQ9UNA4 740 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 MRPL42Q9Y6G3 142 aaKnown RBP15.17■□□□□ 0.02
SPIDR-201ENST00000297423 DGKBQ9Y6T7 804 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 KCNH1O95259 989 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 DHRS4L1P0CG22 281 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 MS4A2Q01362 244 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 ZNF252P-AS1Q0IIN9 211 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 DGKDQ16760 1214 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 HABP4Q5JVS0 413 aaKnown RBP15.17■□□□□ 0.02
SPIDR-201ENST00000297423 GLRA4Q5JXX5 417 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 RAVER1Q8IY67 606 aaKnown RBP15.17■□□□□ 0.02
SPIDR-201ENST00000297423 SIX6OS1Q8N1H7 587 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 HPS1Q92902 700 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 ZNF669Q96BR6 464 aaPredicted RBP15.17■□□□□ 0.02
SPIDR-201ENST00000297423 ILKAPQ9H0C8 392 aaPredicted RBP15.17■□□□□ 0.02
SPIDR-201ENST00000297423 ING2Q9H160 280 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 EFCAB1Q9HAE3 211 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 C9JVG2 144 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 EXTL3O43909 919 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 E2F6O75461 281 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 UGT1A6P19224 532 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 UGT1A1P22309 533 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 UGT1A4P22310 534 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 UGT1A3P35503 534 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 UGT1A5P35504 534 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 PHKA2P46019 1235 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 IL1RL1Q01638 556 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 KCNT2Q6UVM3 1135 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 PHF13Q86YI8 300 aaPredicted RBP15.17■□□□□ 0.02
SPIDR-201ENST00000297423 RIOX2Q8IUF8 465 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 C2orf69Q8N8R5 385 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 REPS2Q8NFH8 660 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 TUBGCP4Q9UGJ1 667 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 AP4E1Q9UPM8 1137 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 K7EPI3 171 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 PIGNO95427 931 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 SLC25A27O95847 323 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 MAGP20916 626 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 NDST2P52849 883 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 XIAPP98170 497 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 PTP4A2Q12974 167 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 PTPN20Q4JDL3 420 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 MAP4K3Q8IVH8 894 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 TFAP2BQ92481 460 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 C12orf43Q96C57 262 aaKnown RBP15.17■□□□□ 0.02
SPIDR-201ENST00000297423 DRC3Q9H069 523 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 PTPRHQ9HD43 1115 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 RAB26Q9ULW5 256 aa15.17■□□□□ 0.02
SPIDR-201ENST00000297423 PTPRJQ12913 1337 aa15.16■□□□□ 0.02
SPIDR-201ENST00000297423 A0A0G2JLL6 359 aaPredicted RBP15.16■□□□□ 0.02
SPIDR-201ENST00000297423 NDUFB5O43674 189 aa15.16■□□□□ 0.02
SPIDR-201ENST00000297423 SERPINB9P50453 376 aa15.16■□□□□ 0.02
SPIDR-201ENST00000297423 HNRNPDQ14103 355 aaKnown RBP15.16■□□□□ 0.02
SPIDR-201ENST00000297423 SEL1L3Q68CR1 1132 aa15.16■□□□□ 0.02
SPIDR-201ENST00000297423 GK5Q6ZS86 529 aa15.16■□□□□ 0.02
SPIDR-201ENST00000297423 PRRT2Q7Z6L0 340 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms