RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 LAYNQ6UX15 382 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 CPNE1Q99829 537 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZCWPW1Q9H0M4 648 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 IL1RL2Q9HB29 575 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 GOLGA2P5Q9HBQ8 144 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 SYN3O14994 580 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 AKAP10O43572 662 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 LSP1P33241 339 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZFP42Q96MM3 310 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 SFMBT1Q9UHJ3 866 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 TDRKHQ9Y2W6 561 aaKnown RBP18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 IGLV3-22A0A075B6J6 115 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 RFX3P48380 749 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 AIF1P55008 147 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 HNRNPH2P55795 449 aaKnown RBP18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZNF670Q9BS34 389 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 TLR10Q9BXR5 811 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 IL22Q9GZX6 179 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 HNRNPRO43390 633 aaKnown RBP18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZBTB14O43829 449 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 CCNT2O60583 730 aaKnown RBP18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 FMO1Q01740 532 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 NAB1Q13506 487 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 MIIPQ5JXC2 388 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 FUT10Q6P4F1 479 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 SOX13Q9UN79 622 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 PECAM1P16284 738 aaPredicted RBP18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 SULT2A1Q06520 285 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 DPYSL3Q14195 570 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 CEP70Q8NHQ1 597 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 MED8Q96G25 268 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 TM6SF2Q9BZW4 377 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 OPLAHO14841 1288 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 IL1BP01584 269 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 SPATA31D3P0C874 917 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 BMPR2Q13873 1038 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 SPATA31D4Q6ZUB0 917 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 FBXO39Q8N4B4 442 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 MAB21L3Q8N8X9 362 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 DBF4BQ8NFT6 615 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 MAGEB10Q96LZ2 347 aaPredicted RBP18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 RNF157Q96PX1 679 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 CATP04040 527 aaKnown RBP18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 HPGDP15428 266 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 CES1P23141 567 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 TAF10Q12962 218 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZNF555Q8NEP9 628 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 ERLEC1Q96DZ1 483 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 DMGDHQ9UI17 866 aaKnown RBP18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 INSCQ1MX18 579 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 NRDE2Q9H7Z3 1164 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 A8MX80 341 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 TMEM114B3SHH9 223 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 GUCA1CO95843 209 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 CCNB1P14635 433 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 CAPZA2P47755 286 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 KCNMA1Q12791 1236 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 PSRC1Q6PGN9 363 aaPredicted RBP18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 CLEC4FQ8N1N0 589 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 ATAD1Q8NBU5 361 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 ACOX2Q99424 681 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 THTPAQ9BU02 230 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 C11orf49Q9H6J7 331 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 Q9Y3F1 56 aa18.03■□□□□ 0.48
CDC42EP3-201ENST00000295324 LTN1O94822 1766 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 CALCAP01258 141 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 PCID2Q5JVF3 399 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 GRAMD4Q6IC98 578 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 MIEF1Q9NQG6 463 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 TAS2R14Q9NYV8 317 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 KIAA1522Q9P206 1035 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 APPL1Q9UKG1 709 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 ANKRD65E5RJM6 399 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 DGKIO75912 1065 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 BMP10O95393 424 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 CD86P42081 329 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 POLNQ7Z5Q5 900 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 HORMAD1Q86X24 394 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 BSNDQ8WZ55 320 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 DACH2Q96NX9 599 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 LHX5Q9H2C1 402 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 H2AFY2Q9P0M6 372 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 TM9SF1O15321 606 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 CHI3L1P36222 383 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 PIK3CGP48736 1102 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 NEPROQ6NW34 567 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 STX19Q8N4C7 294 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZNF513Q8N8E2 541 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 FAM124BQ9H5Z6 455 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 CATSPERZQ9NTU4 200 aa18.02■□□□□ 0.48
CDC42EP3-201ENST00000295324 AOC2O75106 756 aa18.02■□□□□ 0.47
CDC42EP3-201ENST00000295324 CPA6Q8N4T0 437 aa18.02■□□□□ 0.47
CDC42EP3-201ENST00000295324 GPR152Q8TDT2 470 aa18.02■□□□□ 0.47
CDC42EP3-201ENST00000295324 PCDHGC5Q9Y5F6 944 aa18.02■□□□□ 0.47
CDC42EP3-201ENST00000295324 HTR1BP28222 390 aa18.01■□□□□ 0.47
CDC42EP3-201ENST00000295324 TRPM8Q7Z2W7 1104 aa18.01■□□□□ 0.47
CDC42EP3-201ENST00000295324 BBS7Q8IWZ6 715 aa18.01■□□□□ 0.47
CDC42EP3-201ENST00000295324 MYCBPAPQ8TBZ2 947 aa18.01■□□□□ 0.47
CDC42EP3-201ENST00000295324 REPS1Q96D71 796 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms