RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PCSK7Q16549 785 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 TBCELQ5QJ74 424 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 TCP10LQ8TDR4 215 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 TARS2Q9BW92 718 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 MYLK2Q9H1R3 596 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 TMEM134Q9H6X4 195 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 FAM49BQ9NUQ9 324 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 USE1Q9NZ43 259 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 CNTNAP2Q9UHC6 1331 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 CFAP99D6REC4 459 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 ACKR2O00590 384 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 CLOCKO15516 846 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 ME2P23368 584 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 GLRA2P23416 452 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 C21orf59P57076 290 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 RPL10AP62906 217 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 CDK16Q00536 496 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 LPIN1Q14693 890 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 PPP2R2DQ66LE6 453 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 PRMT9Q6P2P2 845 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 SPATA2LQ8IUW3 424 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 SLC7A14Q8TBB6 771 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 ACTL9Q8TC94 416 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 PNMA5Q96PV4 448 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 RUSC1Q9BVN2 902 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 GPRC5CQ9NQ84 441 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 MOSPD1Q9UJG1 213 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 PSMG1O95456 288 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 MAPTP10636 758 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 GARTP22102 1010 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 PCSK1P29120 753 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 BMP8BP34820 402 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 MAPRE1Q15691 268 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 UGT3A1Q6NUS8 523 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 CLVS1Q8IUQ0 354 aaPredicted RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 AGAP11Q8TF27 550 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 ACSF2Q96CM8 615 aaPredicted RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 TMEM237Q96Q45 408 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 DCLK3Q9C098 648 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 KCTD10Q9H3F6 313 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 SLC38A7Q9NVC3 462 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 VTI1BQ9UEU0 232 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 RUVBL2Q9Y230 463 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 AAR2Q9Y312 384 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 UBDO15205 165 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 AKAP3O75969 853 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 MED26O95402 600 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 NPTX2P47972 431 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 EIF2B2P49770 351 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 GIT2Q14161 759 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 VEPH1Q14D04 833 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 B3GNT6Q6ZMB0 384 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 TDRD5Q8NAT2 981 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 ZNF75CPQ92670 426 aaPredicted RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 RAD9AQ99638 391 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 BDH2Q9BUT1 245 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 DDX18Q9NVP1 670 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 NINJ2Q9NZG7 142 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 SELENONQ9NZV5 590 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 SORCS3Q9UPU3 1222 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 C2CD2Q9Y426 696 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 C1orf232A0A0U1RR37 186 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 PDGFRBP09619 1106 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 CHRM3P20309 590 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 AKT1P31749 480 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 KRT20P35900 424 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 ARL2P36404 184 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 ALDH7A1P49419 539 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 MPP3Q13368 585 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 ATP1A4Q13733 1029 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 CAPSQ13938 189 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 ACCSLQ4AC99 568 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 AGKQ53H12 422 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 SLC25A41Q8N5S1 370 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 UBA3Q8TBC4 463 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 CKAP2Q8WWK9 683 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 HPDLQ96IR7 371 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 RMND5AQ9H871 391 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 PCDHGC5Q9Y5F6 944 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 RAD54BQ9Y620 910 aa12.07□□□□□ -0.48
SYNGAP1-201ENST00000293748 PDZK1P1A8MUH7 402 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 ASNA1O43681 348 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 UNC5CO95185 931 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 NPTXRO95502 500 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 CBX6O95503 412 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 EOMESO95936 686 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 CPB1P15086 417 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 PPM1AP35813 382 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 TTLL9Q3SXZ7 439 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 SYTL3Q4VX76 610 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 PLEKHG4Q58EX7 1191 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 TTMPQ5BVD1 217 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 CENPLQ8N0S6 344 aaPredicted RBP12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 SVOPQ8N4V2 548 aa12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 PRCCQ92733 491 aaPredicted RBP12.06□□□□□ -0.48
SYNGAP1-201ENST00000293748 DLG3Q92796 817 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms