RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 DLL3Q9NYJ7 618 aa10.09□□□□□ -0.79
CCDC58-201ENST00000291458 INTS6Q9UL03 887 aaKnown RBP10.09□□□□□ -0.79
CCDC58-201ENST00000291458 C4orf47A7E2U8 309 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 TTC34A8MYJ7 566 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 SLC30A4O14863 429 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 TEX33O43247 280 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 MOCS3O95396 460 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 ADCY5O95622 1261 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 LSM8O95777 96 aaKnown RBP10.08□□□□□ -0.8
CCDC58-201ENST00000291458 SLC2A3P11169 496 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 JUNDP17535 347 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 CHRNB2P17787 502 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 CD6P30203 668 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 CDH5P33151 784 aaPredicted RBP10.08□□□□□ -0.8
CCDC58-201ENST00000291458 PSMD8P48556 350 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 TPMTP51580 245 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 IRX4P78413 519 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 CDR2Q01850 454 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 AUHQ13825 339 aaKnown RBP10.08□□□□□ -0.8
CCDC58-201ENST00000291458 QPCTQ16769 361 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 C15orf59Q2T9L4 293 aaPredicted RBP10.08□□□□□ -0.8
CCDC58-201ENST00000291458 PPM1JQ5JR12 505 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 MPP7Q5T2T1 576 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 DESI1Q6ICB0 168 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 SLC36A4Q6YBV0 504 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 BEND5Q7L4P6 421 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 TFAP2DQ7Z6R9 452 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 ZCCHC9Q8N567 271 aaKnown RBP10.08□□□□□ -0.8
CCDC58-201ENST00000291458 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
CCDC58-201ENST00000291458 OR2T3Q8NH03 318 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 FIBINQ8TAL6 211 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 PRR7Q8TB68 274 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 AZIN2Q96A70 460 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 PCDHB18PQ96TA0 734 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 NPY6RQ99463 290 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 PRMT1Q99873 361 aaKnown RBP10.08□□□□□ -0.8
CCDC58-201ENST00000291458 PRSS16Q9NQE7 514 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 ANLNQ9NQW6 1124 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 ERVW-1Q9UQF0 538 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 DMDP11532 3685 aa10.08□□□□□ -0.8
CCDC58-201ENST00000291458 PLXNA2O75051 1894 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 A0A1B0GVM2 712 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 TCAF2A6NFQ2 919 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 FAM47DPA6NHR8 397 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 TMCO5BA8MYB1 307 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 NPC1O15118 1278 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 TIMM44O43615 452 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 SRGAP2O75044 1071 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 SIN3BO75182 1162 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 CNTN5O94779 1100 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 DNTTP04053 509 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 VAV1P15498 845 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 NSFP46459 744 aaKnown RBP10.07□□□□□ -0.8
CCDC58-201ENST00000291458 ZNF165P49910 485 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 CAMK2GQ13555 558 aaPredicted RBP10.07□□□□□ -0.8
CCDC58-201ENST00000291458 ENPP2Q13822 863 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 PLEKHG6Q3KR16 790 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 POM121L1PQ3SYA9 428 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 ALFQ53S48 1182 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 ZNF776Q68DI1 518 aaPredicted RBP10.07□□□□□ -0.8
CCDC58-201ENST00000291458 LAYNQ6UX15 382 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 APTXQ7Z2E3 356 aaKnown RBP10.07□□□□□ -0.8
CCDC58-201ENST00000291458 ERMP1Q7Z2K6 904 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 DNAAF5Q86Y56 855 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 ZDHHC17Q8IUH5 632 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 SYT12Q8IV01 421 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 STK40Q8N2I9 435 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 OR52K2Q8NGK3 314 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 JOSD2Q8TAC2 188 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 LMLNQ96KR4 655 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 NUSAP1Q9BXS6 441 aaKnown RBP10.07□□□□□ -0.8
CCDC58-201ENST00000291458 MUC3BQ9H195 1237 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 TMEM245Q9H330 911 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 WDCPQ9H6R7 721 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 PRDM9Q9NQV7 894 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 MPP6Q9NZW5 540 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 KIAA1522Q9P206 1035 aaPredicted RBP10.07□□□□□ -0.8
CCDC58-201ENST00000291458 USP36Q9P275 1121 aaKnown RBP10.07□□□□□ -0.8
CCDC58-201ENST00000291458 VPS28Q9UK41 221 aa10.07□□□□□ -0.8
CCDC58-201ENST00000291458 DOCK4Q8N1I0 1966 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 PCDH15Q96QU1 1955 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 A0A1W2PP55 124 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 SMTNL1A8MU46 457 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 I6L893 689 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 PLK4O00444 970 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 MID1O15344 667 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 FSBPO95073 299 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 SERPINC1P01008 464 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ASLP04424 464 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 RHOCP08134 193 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ENGP17813 658 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 SDHBP21912 280 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ACSL1P33121 698 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 RDXP35241 583 aaKnown RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 GABRB2P47870 512 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ATXN3P54252 364 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 RPS14P62263 151 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms