RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SV2AQ7L0J3 742 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 TSPAN14Q8NG11 270 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 TTPALQ9BTX7 342 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 DCLK3Q9C098 648 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 MYO1GB0I1T2 1018 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 CDH3P22223 829 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 BNIP1Q12981 228 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF177Q13360 481 aaPredicted RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 KRT33BQ14525 404 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 IMPG1Q17R60 797 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 PERM1Q5SV97 790 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 MORN1Q5T089 497 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 DHDDSQ86SQ9 333 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 UNC93AQ86WB7 457 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 FEZF2Q8TBJ5 459 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 FAM53CQ9NYF3 392 aa11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.61□□□□□ -0.55
NPC1L1-201ENST00000289547 LZTS3O60299 673 aaPredicted RBP11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 TSC22D2O75157 780 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 GSNP06396 782 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 PSEN1P49768 467 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF268Q14587 947 aaPredicted RBP11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 CCNG2Q16589 344 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 NRF1Q16656 503 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 CEP78Q5JTW2 689 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 PLPP4Q5VZY2 271 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 IL31Q6EBC2 164 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF662Q6ZS27 426 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 KIAA0895Q8NCT3 520 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 SGF29Q96ES7 293 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 ZBTB45Q96K62 511 aaPredicted RBP11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 CISHQ9NSE2 258 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 TMEM161AQ9NX61 479 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 MRPS23Q9Y3D9 190 aaKnown RBP11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 DFFAO00273 331 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 DDX3XO00571 662 aaKnown RBP eCLIP11.6□□□□□ -0.553e-19■■■□□ 15.3
NPC1L1-201ENST00000289547 SPATA31C1P0DKV0 1188 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 CSH1P0DML2 217 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 CSH2P0DML3 217 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 RALBP11234 206 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 ARF4P18085 180 aaPredicted RBP11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 SSTR1P30872 391 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 NET1Q7Z628 596 aaPredicted RBP11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 CCNJLQ8IV13 435 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 SCLYQ96I15 445 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 SELENONQ9NZV5 590 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 CDH9Q9ULB4 789 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 DOLKQ9UPQ8 538 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 FAM237AA0A1B0GTK4 181 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 EEF2KO00418 725 aaKnown RBP11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 LYNP07948 512 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 COL6A1P12109 1028 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 ETFBP38117 255 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 NR1D2Q14995 579 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 RIN3Q8TB24 985 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 ARNTL2Q8WYA1 636 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 PPP1R2P1Q96PQ5 205 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 TMEM121Q9BTD3 319 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 DHX33Q9H6R0 707 aaKnown RBP11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 STMN3Q9NZ72 180 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 IRS2Q9Y4H2 1338 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 FLT3P36888 993 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC25A3Q00325 362 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 LLGL2Q6P1M3 1020 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC20A1Q8WUM9 679 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 NRDE2Q9H7Z3 1164 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 DKK3Q9UBP4 350 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC25A13Q9UJS0 675 aa11.6□□□□□ -0.55
NPC1L1-201ENST00000289547 ZSCAN9O15535 394 aaPredicted RBP11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ZFP1Q6P2D0 407 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 FITM2Q8N6M3 262 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ULK4Q96C45 1275 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 RIPOR3Q96MK2 946 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 SAMD11Q96NU1 681 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 CDRT15Q96T59 188 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 CEP44Q9C0F1 390 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 MCOLN1Q9GZU1 580 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 HMG20AQ9NP66 347 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 HBS1LQ9Y450 684 aaKnown RBP11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 PAPPAQ13219 1627 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 LSM8O95777 96 aaKnown RBP11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 F2P00734 622 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ATAT1Q5SQI0 421 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 SH3RF1Q7Z6J0 888 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 TAS1R2Q8TE23 839 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC39A10Q9ULF5 831 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 PAEPP09466 180 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 CYBAP13498 195 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 GRK2P25098 689 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ST13P50502 369 aaKnown RBP11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ITGA9Q13797 1035 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF697Q5TEC3 545 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 UTS2BQ765I0 119 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 TAS2R42Q7RTR8 314 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 OR8H2Q8N162 312 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 PLEKHG4BQ96PX9 1271 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 POP1Q99575 1024 aaKnown RBP11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 FRMD8Q9BZ67 464 aaPredicted RBP11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 WDCPQ9H6R7 721 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms