RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CALB1P05937 261 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 PABPC1P11940 636 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 GABRG2P18507 467 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 RDXP35241 583 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 GGCXP38435 758 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 P2RY2P41231 377 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 NSFP46459 744 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 COPAP53621 1224 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 DEUP1Q05D60 604 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 KLHL30Q0D2K2 578 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 CAMK2GQ13555 558 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 FUT11Q495W5 492 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 EOGTQ5NDL2 527 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 FAM72AQ5TYM5 149 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 FAM72DQ6L9T8 149 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 ANKS1BQ7Z6G8 1248 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 ALYREFQ86V81 257 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 NLRP14Q86W24 1093 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 FAM72BQ86X60 149 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 LGI2Q8N0V4 545 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 CCAR2Q8N163 923 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 FRMD1Q8N878 549 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 KDM1BQ8NB78 822 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 HJURPQ8NCD3 748 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 RNF214Q8ND24 703 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 WFIKKN2Q8TEU8 576 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 FNIP1Q8TF40 1166 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 GAB3Q8WWW8 586 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 NKD2Q969F2 451 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 NTAN1Q96AB6 310 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 HHIPQ96QV1 700 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 DDX50Q9BQ39 737 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 MKRN2Q9H000 416 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 FAM204AQ9H8W3 233 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 CACNA2D2Q9NY47 1150 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 PPARGC1AQ9UBK2 798 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 MBD1Q9UIS9 605 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 GGA2Q9UJY4 613 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 STAP1Q9ULZ2 295 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 SLC8A2Q9UPR5 921 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 LUC7L2Q9Y383 392 aaKnown RBP9.45□□□□□ -0.9
HMGN1-201ENST00000288344 NUP205Q92621 2012 aa9.45□□□□□ -0.9
HMGN1-201ENST00000288344 KNL1Q8NG31 2342 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 A0A1B0GVM2 712 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 TCAF2A6NFQ2 919 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 AXIN1O15169 862 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 ZMPSTE24O75844 475 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 CD160O95971 181 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 MOCS2O96007 188 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 IGLV3-19P01714 112 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 LMNAP02545 664 aaKnown RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 DLDP09622 509 aaKnown RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 ABCB4P21439 1286 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 PRKCHP24723 683 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 MZF1P28698 734 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 CTSOP43234 321 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 SULT1E1P49888 294 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 TPM4P67936 248 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 ATP11AP98196 1134 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 SLC12A1Q13621 1099 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 NUMA1Q14980 2115 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 PLEKHG6Q3KR16 790 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 PLK5Q496M5 336 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 ACBD5Q5T8D3 534 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 MBLAC2Q68D91 279 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 CHST9Q7L1S5 443 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 CIR1Q86X95 450 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 FAM131BQ86XD5 332 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 AHI1Q8N157 1196 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 CCDC185Q8N715 623 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 MSANTD4Q8NCY6 345 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 OR8K1Q8NGG5 319 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 FRS2Q8WU20 508 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 CPLX3Q8WVH0 158 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 ATRIPQ8WXE1 791 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 MRGPRX1Q96LB2 322 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 PSMB7Q99436 277 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 CHP1Q99653 195 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 FEM1AQ9BSK4 669 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 CNPY3Q9BT09 278 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 DUSP15Q9H1R2 295 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 NDFIP2Q9NV92 336 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 KIAA1522Q9P206 1035 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 SLC12A6Q9UHW9 1150 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 VANGL2Q9ULK5 521 aa9.44□□□□□ -0.9
HMGN1-201ENST00000288344 TNRC6BQ9UPQ9 1833 aaKnown RBP9.44□□□□□ -0.9
HMGN1-201ENST00000288344 SYNJ2BP-COX16A0A087WUM0 186 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 SSU72P8A0A1W2PR75 194 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 DCLK1O15075 740 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 CCP110O43303 1012 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 ZNF821O75541 412 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-201ENST00000288344 ADH1BP00325 375 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 CYP1A2P05177 515 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 GPD1P21695 349 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 CSKP41240 450 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 WASP42768 502 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 CDH4P55283 916 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 PITRM1Q5JRX3 1037 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms