RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 HIPK4Q8NE63 616 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 CATSPER1Q8NEC5 780 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 XPNPEP3Q9NQH7 507 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 VPS28Q9UK41 221 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 PADI4Q9UM07 663 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 PSMD13Q9UNM6 376 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 DNAJC16Q9Y2G8 782 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 C5orf42Q9H799 3197 aa10.62□□□□□ -0.71
SKA1-201ENST00000285116 PAPSS1O43252 624 aaPredicted RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 NR1H2P55055 460 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 CBX3Q13185 183 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 ORC1Q13415 861 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 N4BP2L1Q5TBK1 243 aaPredicted RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 NCBP2-AS2Q69YL0 99 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 EFCAB12Q6NXP0 572 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 PMF1Q6P1K2 205 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 DENND5BQ6ZUT9 1274 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 TTC30AQ86WT1 665 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 HS6ST3Q8IZP7 471 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 POU5F2Q8N7G0 328 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 PPP4R1Q8TF05 950 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 ARNTL2Q8WYA1 636 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 CSPG4P5Q96PW8 444 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 KCNK16Q96T55 309 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 PLEKHA5Q9HAU0 1116 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 DPP3Q9NY33 737 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 PCDHB12Q9Y5F1 795 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 CEP290O15078 2479 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 TRIP11Q15643 1979 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 TMEM221A6NGB7 291 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 SORBS2O94875 1100 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 ARIH2O95376 493 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 SRGAP2BP0DMP2 458 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 ATP6V1B1P15313 513 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 DNAJB1P25685 340 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 SLC5A2P31639 672 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 CREB5Q02930 508 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 PPIDQ08752 370 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 MTA1Q13330 715 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 APOFQ13790 326 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 LY6KQ17RY6 165 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 SPANXN3Q5MJ09 141 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 RARS2Q5T160 578 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 GRTP1Q5TC63 336 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 HEATR6Q6AI08 1181 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 KCNT2Q6UVM3 1135 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 BNIPLQ7Z465 357 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 ZNF410Q86VK4 478 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 HPS6Q86YV9 775 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 CROCCP3Q8IVE0 287 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 DEFB107AQ8IZN7 70 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 PPP1R14CQ8TAE6 165 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 FNDC8Q8TC99 324 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 TFB1MQ8WVM0 346 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 HTR3CQ8WXA8 447 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 DCPSQ96C86 337 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 CNDP1Q96KN2 507 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 CPNE1Q99829 537 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 APOL6Q9BWW8 343 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 SPATC1LQ9H0A9 340 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 TMEM165Q9HC07 324 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 DTLQ9NZJ0 730 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 COPG2Q9UBF2 871 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 PAIP2BQ9ULR5 123 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 RAD54BQ9Y620 910 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 AK5Q9Y6K8 562 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 DNAJC25-GNG10A0A024R161 153 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 TPP1O14773 563 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 ITM2AO43736 263 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 GABBR2O75899 941 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 CRTAMO95727 393 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 SLC25A27O95847 323 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 MX2P20592 715 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 ITGAXP20702 1163 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 ADSLP30566 484 aaPredicted RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 HOXD11P31277 338 aaPredicted RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 MTTPP55157 894 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 ABCE1P61221 599 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 GBE1Q04446 702 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 HSDL1Q3SXM5 330 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 FSCBQ5H9T9 825 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 GADL1Q6ZQY3 521 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 RTKNQ9BST9 563 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 MRPL1Q9BYD6 325 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 CYP4F11Q9HBI6 524 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 NGRNQ9NPE2 291 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 GPATCH2LQ9NWQ4 482 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 IGSF9Q9P2J2 1179 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 PRPF19Q9UMS4 504 aaKnown RBP10.61□□□□□ -0.71
SKA1-201ENST00000285116 AP4B1Q9Y6B7 739 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 CDY2AQ9Y6F7 541 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 CDY1Q9Y6F8 540 aa10.61□□□□□ -0.71
SKA1-201ENST00000285116 COL4A4P53420 1690 aaPredicted RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 CAPNS1P04632 268 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 FAM58BPP0C7Q3 252 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 PCSK6P29122 969 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 GARSP41250 739 aaKnown RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 GRM5P41594 1212 aa10.6□□□□□ -0.71
SKA1-201ENST00000285116 MAGEA10P43363 369 aaPredicted RBP10.6□□□□□ -0.71
SKA1-201ENST00000285116 HSPA13P48723 471 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms