RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TNNI1P19237 187 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 GABRB2P47870 512 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 YWHAZP63104 245 aaKnown RBP10.59□□□□□ -0.71
UPF3B-201ENST00000276201 SULT2A1Q06520 285 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 NAB1Q13506 487 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 PAN2Q504Q3 1202 aaKnown RBP10.59□□□□□ -0.71
UPF3B-201ENST00000276201 ZFYVE27Q5T4F4 411 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 ARMC3Q5W041 872 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 CES4AQ5XG92 561 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 KLC3Q6P597 504 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 KBTBD6Q86V97 674 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 ZBTB8OSQ8IWT0 167 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 CMTR2Q8IYT2 770 aaKnown RBP10.59□□□□□ -0.71
UPF3B-201ENST00000276201 RNF169Q8NCN4 708 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 GDPD5Q8WTR4 605 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 DDI1Q8WTU0 396 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 ARNTL2Q8WYA1 636 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 HAUS1Q96CS2 278 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 CPB2Q96IY4 423 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 RBM38Q9H0Z9 239 aaKnown RBP10.59□□□□□ -0.71
UPF3B-201ENST00000276201 C2orf40Q9H1Z8 148 aa10.59□□□□□ -0.71
UPF3B-201ENST00000276201 COL4A4P53420 1690 aaPredicted RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 FNDC1Q4ZHG4 1894 aaPredicted RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 RFXAPO00287 272 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 LRCH4O75427 683 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 EDN1P05305 212 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 PYGLP06737 847 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 ARF4P18085 180 aaPredicted RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 MAGEA3P43357 314 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 RANBP1P43487 201 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 LIG4P49917 911 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 COPAP53621 1224 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 ROR1Q01973 937 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 KDSRQ06136 332 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 BTG3Q14201 252 aaPredicted RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 ADGRE1Q14246 886 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 FAM187BQ17R55 369 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 CLLU1OSQ5K130 101 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 SPOPLQ6IQ16 392 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 LRRC43Q8N309 656 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 FIBCD1Q8N539 461 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 CMTM5Q96DZ9 223 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 CLPTM1LQ96KA5 538 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 FZD8Q9H461 694 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 XAB2Q9HCS7 855 aaKnown RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 FAM105AQ9NUU6 356 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 VPS28Q9UK41 221 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 ADAMTS6Q9UKP5 1117 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 MRPL42Q9Y6G3 142 aaKnown RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 PTPRJQ12913 1337 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 TBKBP1A7MCY6 615 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 ZNF487B1APH4 448 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 OPHN1O60890 802 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 USP1O94782 785 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 APOEP02649 317 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 CD48P09326 243 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 PSMA2P25787 234 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 AXLP30530 894 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 FDFT1P37268 417 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 MAGEA8P43361 318 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 HSPA13P48723 471 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 YWHAGP61981 247 aaKnown RBP eCLIP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 YWHAEP62258 255 aaKnown RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 TBL3Q12788 808 aaKnown RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 TFDP2Q14188 446 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 CFAP157Q5JU67 520 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 WDTC1Q8N5D0 677 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 ARFGAP1Q8N6T3 406 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 GSTCDQ8NEC7 633 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 PIWIL2Q8TC59 973 aaKnown RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 EIF2AQ9BY44 585 aaKnown RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 ADAM33Q9BZ11 813 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 PRMT7Q9NVM4 692 aaPredicted RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 THEGQ9P2T0 379 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 HSFX1Q9UBD0 423 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 CDH22Q9UJ99 828 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 PRPF19Q9UMS4 504 aaKnown RBP10.58□□□□□ -0.72
UPF3B-201ENST00000276201 PSMD13Q9UNM6 376 aa10.58□□□□□ -0.72
UPF3B-201ENST00000276201 KIAA1671Q9BY89 1806 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 TRANK1O15050 2925 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 NLRC5Q86WI3 1866 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 MEIS3P2A8K0S8 358 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 H3BNX3 289 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 VILLO15195 856 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 ZNF623O75123 536 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 EOMESO95936 686 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 PRKCBP05771 671 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 RBP3P10745 1247 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 GRK2P25098 689 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 NUMBP49757 651 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 EFNA5P52803 228 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 AQP4P55087 323 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 DEUP1Q05D60 604 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 NCOA4Q13772 614 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 INSCQ1MX18 579 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 MMEL1Q495T6 779 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 TEDDM1Q5T9Z0 273 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 MBLAC2Q68D91 279 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 NOTUMQ6P988 496 aa10.57□□□□□ -0.72
UPF3B-201ENST00000276201 ICA1LQ8NDH6 482 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms