RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 HOXA6P31267 233 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 SLC6A4P31645 630 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 NBL1P41271 181 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 KIR2DL1P43626 348 aaPredicted RBP13.05□□□□□ -0.32
SGCE-201ENST00000265735 MRPS21P82921 87 aaKnown RBP13.05□□□□□ -0.32
SGCE-201ENST00000265735 DR1Q01658 176 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 PIGHQ14442 188 aaPredicted RBP13.05□□□□□ -0.32
SGCE-201ENST00000265735 MPP7Q5T2T1 576 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 FAM102AQ5T9C2 384 aaPredicted RBP13.05□□□□□ -0.32
SGCE-201ENST00000265735 PIK3R6Q5UE93 754 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 OTUD1Q5VV17 481 aaPredicted RBP13.05□□□□□ -0.32
SGCE-201ENST00000265735 TRNP1Q6NT89 227 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 SND1Q7KZF4 910 aaKnown RBP eCLIP13.05□□□□□ -0.328e-7■■■□□ 16.5
SGCE-201ENST00000265735 BNIPLQ7Z465 357 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 CPNE8Q86YQ8 564 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 RPLP0P6Q8NHW5 317 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 KCNV2Q8TDN2 545 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 CASKIN2Q8WXE0 1202 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 ATOH1Q92858 354 aaPredicted RBP13.05□□□□□ -0.32
SGCE-201ENST00000265735 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.05□□□□□ -0.32
SGCE-201ENST00000265735 CALCOCO1Q9P1Z2 691 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 AMACRQ9UHK6 382 aa13.05□□□□□ -0.32
SGCE-201ENST00000265735 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
SGCE-201ENST00000265735 HOXD9P28356 352 aaPredicted RBP13.04□□□□□ -0.32
SGCE-201ENST00000265735 GBP1P32455 592 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 CETN2P41208 172 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 CARSP49589 748 aaKnown RBP13.04□□□□□ -0.32
SGCE-201ENST00000265735 DGKGP49619 791 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 CSTF1Q05048 431 aaKnown RBP13.04□□□□□ -0.32
SGCE-201ENST00000265735 KDSRQ06136 332 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 PPP2R5DQ14738 602 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 ZC3H12AQ5D1E8 599 aaKnown RBP13.04□□□□□ -0.32
SGCE-201ENST00000265735 PPP1R15BQ5SWA1 713 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 GRAMD4Q6IC98 578 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 AADACL2Q6P093 401 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 TSSK4Q6SA08 328 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 SYT13Q7L8C5 426 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 ADAT2Q7Z6V5 191 aaKnown RBP13.04□□□□□ -0.32
SGCE-201ENST00000265735 KATNAL2Q8IYT4 538 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 ZBTB44Q8NCP5 570 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 BHMTQ93088 406 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 TMA16Q96EY4 203 aaKnown RBP13.04□□□□□ -0.32
SGCE-201ENST00000265735 MCEEQ96PE7 176 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 FAM126AQ9BYI3 521 aaPredicted RBP13.04□□□□□ -0.32
SGCE-201ENST00000265735 SLC2A11Q9BYW1 496 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 FAM114A2Q9NRY5 505 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 DDIT4Q9NX09 232 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 XPO7Q9UIA9 1087 aaKnown RBP13.04□□□□□ -0.32
SGCE-201ENST00000265735 HCN2Q9UL51 889 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 CLEC4EQ9ULY5 219 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 NFU1Q9UMS0 254 aa13.04□□□□□ -0.32
SGCE-201ENST00000265735 GOLGA6L7A0A1B0GV03 622 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 TBC1D3BA6NDS4 549 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 ZSCAN5CA6NGD5 496 aaPredicted RBP13.03□□□□□ -0.32
SGCE-201ENST00000265735 SIGLEC16A6NMB1 481 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 PRRT4C9JH25 899 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 PROB1E7EW31 1015 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 M0QYT0 321 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 TTI1O43156 1089 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 APOEP02649 317 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 SLC2A3P11169 496 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 CCR1P32246 355 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 FLT3P36888 993 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 PLA2G5P39877 138 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 SSR1P43307 286 aaKnown RBP13.03□□□□□ -0.32
SGCE-201ENST00000265735 SGSHP51688 502 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 RPL7AP62424 266 aaKnown RBP13.03□□□□□ -0.32
SGCE-201ENST00000265735 CYP1B1Q16678 543 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 SLC25A52Q3SY17 297 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 HSF5Q4G112 596 aaPredicted RBP13.03□□□□□ -0.32
SGCE-201ENST00000265735 HSP90B2PQ58FF3 399 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 EMC10Q5UCC4 262 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 LRRC38Q5VT99 294 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 NUDT18Q6ZVK8 323 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 NIPA2Q8N8Q9 360 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 PRELID2Q8N945 189 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 DDI1Q8WTU0 396 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 MAGOHBQ96A72 148 aaKnown RBP13.03□□□□□ -0.32
SGCE-201ENST00000265735 BTN2A3PQ96KV6 586 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 DDX50Q9BQ39 737 aaKnown RBP13.03□□□□□ -0.32
SGCE-201ENST00000265735 FAM204AQ9H8W3 233 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 TMEM51Q9NW97 253 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 PCYOX1Q9UHG3 505 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 HPCAL4Q9UM19 191 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 CACNA1HO95180 2353 aa13.03□□□□□ -0.32
SGCE-201ENST00000265735 MYO18AQ92614 2054 aaKnown RBP13.03□□□□□ -0.32
SGCE-201ENST00000265735 GOLGA8SH3BPF8 625 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 TSPAN3O60637 253 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 ENDOD1O94919 500 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 KRT3P12035 628 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 TFE3P19532 575 aaPredicted RBP13.02□□□□□ -0.32
SGCE-201ENST00000265735 SEC13P55735 322 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 MTA1Q13330 715 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 HLTFQ14527 1009 aaKnown RBP eCLIP13.02□□□□□ -0.32
SGCE-201ENST00000265735 C2orf27AQ580R0 203 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 MS4A13Q5J8X5 152 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 RFWD3Q6PCD5 774 aa13.02□□□□□ -0.32
SGCE-201ENST00000265735 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms