RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 NUDT17P0C025 328 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 EPB42P16452 691 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 PAX3P23760 479 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 PLK1P53350 603 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 CHRNB3Q05901 458 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 BCL2L1Q07817 233 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 TBL3Q12788 808 aaKnown RBP14.25□□□□□ -0.13
CDH3-201ENST00000264012 FAM35AQ86V20 835 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 INPP5DQ92835 1189 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 LGMNQ99538 433 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 SELENONQ9NZV5 590 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 AFDNP55196 1824 aaKnown RBP14.25□□□□□ -0.13
CDH3-201ENST00000264012 TPP1O14773 563 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 XPO1O14980 1071 aaKnown RBP14.25□□□□□ -0.13
CDH3-201ENST00000264012 CCNT2O60583 730 aaKnown RBP14.25□□□□□ -0.13
CDH3-201ENST00000264012 HOXB8P17481 243 aaPredicted RBP14.25□□□□□ -0.13
CDH3-201ENST00000264012 CYP51A1Q16850 503 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 TRMT5Q32P41 509 aaKnown RBP14.25□□□□□ -0.13
CDH3-201ENST00000264012 PABPC1LQ4VXU2 614 aaKnown RBP14.25□□□□□ -0.13
CDH3-201ENST00000264012 PACS2Q86VP3 889 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 FTHL17Q9BXU8 183 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 MAF1Q9H063 256 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 SYNDIG1Q9H7V2 258 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 CNGB3Q9NQW8 809 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 TUBGCP4Q9UGJ1 667 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 LNPEPQ9UIQ6 1025 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 CRYL1Q9Y2S2 319 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 DYRK1BQ9Y463 629 aa14.25□□□□□ -0.13
CDH3-201ENST00000264012 BANF1O75531 89 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 ERBB2P04626 1255 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 CYP1A1P04798 512 aaPredicted RBP14.24□□□□□ -0.13
CDH3-201ENST00000264012 CCNB1P14635 433 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 FLT3LGP49771 235 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 HECTD3Q5T447 861 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 ARMC12Q5T9G4 340 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 CKAP2Q8WWK9 683 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 CERS2Q96G23 380 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 MID1IP1Q9NPA3 183 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 ARMCX1Q9P291 453 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 ACTL7BQ9Y614 415 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 SRRM3A6NNA2 597 aaPredicted RBP14.24□□□□□ -0.13
CDH3-201ENST00000264012 ENO4A6NNW6 628 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 F8W810 466 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 ADCY6O43306 1168 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 KRT6AP02538 564 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 KRT6BP04259 564 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 KRT6CP48668 564 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 GRIK3Q13003 919 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 PLEKHA7Q6IQ23 1121 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 LRRC8BQ6P9F7 803 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 ANKRD23Q86SG2 305 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 OOSP2Q86WS3 158 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 PALB2Q86YC2 1186 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 CPXM1Q96SM3 734 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 NEUROG2Q9H2A3 272 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 CAAP1Q9H8G2 361 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 POLG2Q9UHN1 485 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 DLG5Q8TDM6 1919 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 SMIM28A0A1B0GU29 152 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 MGAT4DA6NG13 374 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 GLTPD2A6NH11 291 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 RAD51BO15315 384 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 DAB1O75553 588 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 SKIV2L2P42285 1042 aaKnown RBP14.24□□□□□ -0.13
CDH3-201ENST00000264012 ZNF280AP59817 542 aaPredicted RBP14.24□□□□□ -0.13
CDH3-201ENST00000264012 WASHC5Q12768 1159 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 DCLRE1AQ6PJP8 1040 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 P3H2Q8IVL5 708 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 LRRN4Q8WUT4 740 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 TSPAN18Q96SJ8 248 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 KANSL1LA0AUZ9 987 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 ADAMTS3O15072 1205 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 ZNF23P17027 643 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 VCLP18206 1134 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 MSH3P20585 1137 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 CD86P42081 329 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 BRCC3P46736 316 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 PSEN1P49768 467 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 PPM1LQ5SGD2 360 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 LCLAT1Q6UWP7 414 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 UNC5AQ6ZN44 842 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 POU5F2Q8N7G0 328 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 CENPTQ96BT3 561 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 SIKE1Q9BRV8 207 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 GOLGA2P5Q9HBQ8 144 aa14.24□□□□□ -0.13
CDH3-201ENST00000264012 GNG14A0A1W2PPG7 69 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 SYNCRIPO60506 623 aaKnown RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 FSBPO95073 299 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 LCA5LO95447 670 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 NOGQ13253 232 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 KCTD19Q17RG1 926 aaPredicted RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 JADE3Q92613 823 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 PLEKHA8Q96JA3 519 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 NR1H4Q96RI1 486 aaPredicted RBP14.23□□□□□ -0.13
CDH3-201ENST00000264012 B3GNT5Q9BYG0 378 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 DNMT3LQ9UJW3 386 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 BTN3A1O00481 513 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 CILPO75339 1184 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 KATNA1O75449 491 aa14.23□□□□□ -0.13
CDH3-201ENST00000264012 TSHRP16473 764 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms