RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PKDCCQ504Y2 493 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 ZC3H18Q86VM9 953 aaKnown RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 NUP93Q8N1F7 819 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 AZIN2Q96A70 460 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 IGFLR1Q9H665 355 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 CSNK1G1Q9HCP0 422 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 ANKRD6Q9Y2G4 727 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 L3MBTL1Q9Y468 752 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 BIRC5O15392 142 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 IRAK2O43187 625 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 E2F6O75461 281 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 HSPA4LO95757 839 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PGK1P00558 417 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 MLH1P40692 756 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 DSC3Q14574 896 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 SMAD1Q15797 465 aaKnown RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 MRNIPQ6NTE8 343 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 ALKAL1Q6UXT8 129 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TRABD2AQ86V40 505 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CHSY1Q86X52 802 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CRLF3Q8IUI8 442 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PPM1NQ8N819 430 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 FAM71DQ8N9W8 422 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 LRRN4CLQ8ND94 238 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TTPALQ9BTX7 342 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 ARIH1Q9Y4X5 557 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CD52P31358 61 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 SLC26A3P40879 764 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 NDST2P52849 883 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TBX4P57082 545 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 SLC25A11Q02978 314 aaKnown RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 C3orf62Q6ZUJ4 267 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PATL1Q86TB9 770 aaKnown RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 RNF135Q8IUD6 432 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 RAPGEF5Q92565 580 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 ARL8AQ96BM9 186 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 C1orf74Q96LT6 269 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TRMOQ9BU70 441 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 ARHGEF4Q9NR80 690 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 SMARCAL1Q9NZC9 954 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 F5H5T6 163 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TRPA1O75762 1119 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 MYBL2P10244 700 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 ERCC2P18074 760 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PRAMEP78395 509 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PARP15Q460N3 678 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 LRRC8BQ6P9F7 803 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 ZDHHC24Q6UX98 284 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 AGGF1Q8N302 714 aaeCLIP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 FBXO36Q8NEA4 188 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 DQX1Q8TE96 717 aaKnown RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TRIB2Q92519 343 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PAFAH2Q99487 392 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 SMOC2Q9H3U7 446 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 HPS4Q9NQG7 708 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 SEPT3Q9UH03 358 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TBK1Q9UHD2 729 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TMCO1Q9UM00 188 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CDY1Q9Y6F8 540 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 A0A0U1RQJ8 604 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 DNM1LO00429 736 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PIK3R2O00459 728 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 ZNF197O14709 1029 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 SLC9A3R1O14745 358 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CLDN11O75508 207 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 DNAJC8O75937 253 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 LMNAP02545 664 aaKnown RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CCDC130P13994 396 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 IL31Q6EBC2 164 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PMF1Q6P1K2 205 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TTC27Q6P3X3 843 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CHMP1BQ7LBR1 199 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 ATG4AQ8WYN0 398 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 OTUB1Q96FW1 271 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 APOPT1Q96IL0 206 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TWNKQ96RR1 684 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 EIF2AQ9BY44 585 aaKnown RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CHCHD3Q9NX63 227 aaKnown RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 RAB23Q9ULC3 237 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PRG3Q9Y2Y8 225 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CXorf51AA0A1B0GTR3 108 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 KLF11O14901 512 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 CCDC15Q0P6D6 951 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 MAPRE2Q15555 327 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PRUNE1Q86TP1 453 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 FAM9CQ8IZT9 166 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 PHC3Q8NDX5 983 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 LRRC37BQ96QE4 947 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 EFHD1Q9BUP0 239 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 KLK14Q9P0G3 267 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 TUBGCP4Q9UGJ1 667 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 BAIAP2L1Q9UHR4 511 aa8.41□□□□□ -1.06
PTPN3-201ENST00000262539 RRP15Q9Y3B9 282 aaKnown RBP8.41□□□□□ -1.06
PTPN3-201ENST00000262539 SERPINF2P08697 491 aa8.4□□□□□ -1.06
PTPN3-201ENST00000262539 RBP1P09455 135 aa8.4□□□□□ -1.06
PTPN3-201ENST00000262539 AKAP5P24588 427 aa8.4□□□□□ -1.06
PTPN3-201ENST00000262539 TYK2P29597 1187 aa8.4□□□□□ -1.06
PTPN3-201ENST00000262539 PRKCZQ05513 592 aa8.4□□□□□ -1.06
PTPN3-201ENST00000262539 SFSWAPQ12872 951 aaKnown RBP8.4□□□□□ -1.06
PTPN3-201ENST00000262539 MARC1Q5VT66 337 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms