RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 EXOC8Q8IYI6 725 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 TRPV1Q8NER1 839 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 SLC2A14Q8TDB8 520 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 SLC35F5Q8WV83 523 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 RTP4Q96DX8 246 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 CMTM5Q96DZ9 223 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 SCYL1Q96KG9 808 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 ZMAT2Q96NC0 199 aaKnown RBP14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 CAPN8A6NHC0 703 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 AMHP03971 560 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 AVPR1AP37288 418 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 PKNOX1P55347 436 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 FCGRTP55899 365 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 IRF9Q00978 393 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 MORN1Q5T089 497 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 ST13P4Q8IZP2 240 aaPredicted RBP14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 CXorf38Q8TB03 319 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 SNX15Q9NRS6 342 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 KIAA0100Q14667 2235 aaKnown RBP14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 MDM4O15151 490 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 C22orf31O95567 290 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 POLBP06746 335 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 ZFXP17010 805 aaPredicted RBP14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 EPHA3P29320 983 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 INHBEP58166 350 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 NMD3Q96D46 503 aaKnown RBP14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 MFSD3Q96ES6 412 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 LENG8Q96PV6 779 aaPredicted RBP14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 FERMT1Q9BQL6 677 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 GCOM2Q9BZD3 368 aaPredicted RBP14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 KLHL4Q9C0H6 718 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 GOLGA2P5Q9HBQ8 144 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 MTMR10Q9NXD2 777 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 CLIC5Q9NZA1 410 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 ITGA11Q9UKX5 1188 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 SLC39A10Q9ULF5 831 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 SLC45A1Q9Y2W3 748 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 NME7Q9Y5B8 376 aa14.81□□□□□ -0.04
SFSWAP-201ENST00000261674 SCN1AP35498 2009 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 CLDN5O00501 218 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 IL1BP01584 269 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 ENO3P13929 434 aaPredicted RBP14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 TPSB2P20231 275 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 ACAT1P24752 427 aaKnown RBP14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 TM4SF4P48230 202 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 CCNIQ14094 377 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 TPSAB1Q15661 275 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 TBCCQ15814 346 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 PPM1LQ5SGD2 360 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 SPNS2Q8IVW8 549 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 SPATA6LQ8N4H0 392 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 PIP4K2CQ8TBX8 421 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 RAET1EQ8TD07 263 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 OR52B2Q96RD2 323 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 SORT1Q99523 831 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.8□□□□□ -0.041e-6■□□□□ 8.4
SFSWAP-201ENST00000261674 KIAA1257Q9ULG3 409 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 ZBTB14O43829 449 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 PRKAR2AP13861 404 aaKnown RBP14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 ATP6V1B1P15313 513 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 GARSP41250 739 aaKnown RBP14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 SEMA5AQ13591 1074 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 CATSPER4Q7RTX7 472 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 KDELC2Q7Z4H8 507 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 TMEM110Q86TL2 294 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 GALNT4Q8N4A0 578 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 MAPK15Q8TD08 544 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 QKIQ96PU8 341 aaKnown RBP eCLIP14.8□□□□□ -0.043e-8■■■■□ 25.6
SFSWAP-201ENST00000261674 NR1H4Q96RI1 486 aaPredicted RBP14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 SLC4A5Q9BY07 1137 aa14.8□□□□□ -0.04
SFSWAP-201ENST00000261674 A0A096LPK6 155 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 M0QYT0 321 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 OR6B1O95007 311 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CHRNGP07510 517 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CTSHP09668 335 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 COX4I1P13073 169 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 VCLP18206 1134 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 GNL1P36915 607 aaPredicted RBP14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 NDUFV1P49821 464 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 MRPS22P82650 360 aaKnown RBP14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 INCA1Q0VD86 236 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 ADIGQ0VDE8 80 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 TUBB3Q13509 450 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 DPYSL2Q16555 572 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 TMCO4Q5TGY1 634 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 NAPRTQ6XQN6 538 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 MFN1Q8IWA4 741 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 ARNTL2Q8WYA1 636 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CERS2Q96G23 380 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 KATNBL1Q9H079 304 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 SSX2IPQ9Y2D8 614 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 PHGDHO43175 533 aaKnown RBP14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 LTFP02788 710 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 ITGAXP20702 1163 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CRABP2P29373 138 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 GP5P40197 560 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 MAGEA3P43357 314 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CNPY1Q3B7I2 92 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CERCAMQ5T4B2 595 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 FAM91A1Q658Y4 838 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms