RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 KBTBD12Q3ZCT8 623 aa28.35■■■□□ 2.13
CCM2-201ENST00000258781 MRRFQ96E11 262 aaKnown RBP28.35■■■□□ 2.13
CCM2-201ENST00000258781 PRMT1Q99873 361 aaKnown RBP28.35■■■□□ 2.13
CCM2-201ENST00000258781 GBA3Q9H227 469 aa28.35■■■□□ 2.13
CCM2-201ENST00000258781 PLAC1Q9HBJ0 212 aa28.35■■■□□ 2.13
CCM2-201ENST00000258781 SSU72Q9NP77 194 aaKnown RBP28.35■■■□□ 2.13
CCM2-201ENST00000258781 SMG5Q9UPR3 1016 aaKnown RBP28.35■■■□□ 2.13
CCM2-201ENST00000258781 MOCS2O96007 188 aaPredicted RBP28.34■■■□□ 2.13
CCM2-201ENST00000258781 APOEP02649 317 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 C1QAP02745 245 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 MPP2Q14168 576 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 TEX44Q53QW1 395 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 KIAA1841Q6NSI8 718 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 UNC5AQ6ZN44 842 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 ARHGAP12Q8IWW6 846 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 CELF6Q96J87 481 aaKnown RBP28.34■■■□□ 2.13
CCM2-201ENST00000258781 ZNF317Q96PQ6 595 aaPredicted RBP28.34■■■□□ 2.13
CCM2-201ENST00000258781 SMC6Q96SB8 1091 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 HERC2P3Q9BVR0 1158 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 TTLL2Q9BWV7 592 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 DOCK4Q8N1I0 1966 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 WDR27A2RRH5 827 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 FAM47DPA6NHR8 397 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 ERI2A8K979 691 aaKnown RBP28.34■■■□□ 2.13
CCM2-201ENST00000258781 WASH4PA8MWX3 477 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 ZDHHC11BP0C7U3 371 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 CCNCP24863 283 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 TUBP50607 506 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 DSG1Q02413 1049 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 EFEMP1Q12805 493 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 DDX53Q86TM3 631 aaKnown RBP28.34■■■□□ 2.13
CCM2-201ENST00000258781 ANKRD42Q8N9B4 389 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 GSDMBQ8TAX9 411 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 DEPDC1BQ8WUY9 529 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 PCDHB12Q9Y5F1 795 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 PCDHA11Q9Y5I1 949 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 MAD1L1Q9Y6D9 718 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 IKBKGQ9Y6K9 419 aa28.34■■■□□ 2.13
CCM2-201ENST00000258781 SDR42E2A6NKP2 422 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 SLC38A8A6NNN8 435 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 F5H423 210 aaPredicted RBP28.33■■■□□ 2.13
CCM2-201ENST00000258781 SUN1O94901 812 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 PPM1AP35813 382 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 ZBTB17Q13105 803 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 PIK3R6Q5UE93 754 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 STEAP4Q687X5 459 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 CCNJLQ8IV13 435 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 MPP5Q8N3R9 675 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 RTL3Q8N8U3 475 aaKnown RBP28.33■■■□□ 2.13
CCM2-201ENST00000258781 ATP6V0D2Q8N8Y2 350 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 MZB1Q8WU39 189 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 STAMBPL1Q96FJ0 436 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 SGSM3Q96HU1 749 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 RSPH14Q9UHP6 348 aa28.33■■■□□ 2.13
CCM2-201ENST00000258781 FGF18O76093 207 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 MAGEA10P43363 369 aaPredicted RBP28.32■■■□□ 2.12
CCM2-201ENST00000258781 AFMIDQ63HM1 303 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 CYS1Q717R9 158 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 ATPAF2Q8N5M1 289 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 DYDC1Q8WWB3 177 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 TEKT5Q96M29 485 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 GORASP1Q9BQQ3 440 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 CLSTN3Q9BQT9 956 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 MARCH2Q9P0N8 246 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 IQANK1A0A1B0GTG1 560 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 EBAG9O00559 213 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 ZBTB24O43167 697 aaPredicted RBP28.32■■■□□ 2.12
CCM2-201ENST00000258781 AP2A1O95782 977 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 INHBAP08476 426 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 ATF6P18850 670 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 DRD4P21917 467 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 OR1D2P34982 312 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 TUFMP49411 452 aaKnown RBP28.32■■■□□ 2.12
CCM2-201ENST00000258781 ACBD5Q5T8D3 534 aaPredicted RBP28.32■■■□□ 2.12
CCM2-201ENST00000258781 C14orf80Q86SX3 495 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 LRRC49Q8IUZ0 686 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 ZSCAN18Q8TBC5 510 aaPredicted RBP28.32■■■□□ 2.12
CCM2-201ENST00000258781 MGARPQ8TDB4 240 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 AUTS2Q8WXX7 1259 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 NAT9Q9BTE0 207 aa28.32■■■□□ 2.12
CCM2-201ENST00000258781 UBE2OQ9C0C9 1292 aaKnown RBP28.32■■■□□ 2.12
CCM2-201ENST00000258781 MTIF3Q9H2K0 278 aaKnown RBP28.32■■■□□ 2.12
CCM2-201ENST00000258781 CARNS1A5YM72 827 aa28.31■■■□□ 2.12
CCM2-201ENST00000258781 IGLV3-27P01718 113 aa28.31■■■□□ 2.12
CCM2-201ENST00000258781 CD68P34810 354 aaPredicted RBP28.31■■■□□ 2.12
CCM2-201ENST00000258781 C10orf120Q5SQS8 335 aa28.31■■■□□ 2.12
CCM2-201ENST00000258781 NUGGCQ68CJ6 796 aa28.31■■■□□ 2.12
CCM2-201ENST00000258781 FAM109BQ6ICB4 259 aaPredicted RBP28.31■■■□□ 2.12
CCM2-201ENST00000258781 PRPF39Q86UA1 669 aaKnown RBP28.31■■■□□ 2.12
CCM2-201ENST00000258781 SLC26A11Q86WA9 606 aa28.31■■■□□ 2.12
CCM2-201ENST00000258781 ZNF683Q8IZ20 524 aa28.31■■■□□ 2.12
CCM2-201ENST00000258781 BTN2A3PQ96KV6 586 aa28.31■■■□□ 2.12
CCM2-201ENST00000258781 FAM107BQ9H098 131 aa28.31■■■□□ 2.12
CCM2-201ENST00000258781 ZNF180Q9UJW8 692 aa28.31■■■□□ 2.12
CCM2-201ENST00000258781 NYNRINQ9P2P1 1898 aaKnown RBP28.31■■■□□ 2.12
CCM2-201ENST00000258781 DFFAO00273 331 aa28.3■■■□□ 2.12
CCM2-201ENST00000258781 DNAJB2P25686 324 aa28.3■■■□□ 2.12
CCM2-201ENST00000258781 IFNAR2P48551 515 aa28.3■■■□□ 2.12
CCM2-201ENST00000258781 MTA1Q13330 715 aa28.3■■■□□ 2.12
CCM2-201ENST00000258781 SPRED2Q7Z698 418 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms