RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PITHD1Q9GZP4 211 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 CXorf21Q9HAI6 301 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MLXIPQ9HAP2 919 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 AURKCQ9UQB9 309 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 A8MVJ9 347 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 PSMD3O43242 534 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 CAMTA2O94983 1202 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 AFPP02771 609 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 PRKCAP17252 672 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 RGS6P49758 472 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 PAGE2BQ5JRK9 111 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ETFRF1Q6IPR1 90 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 AFTPHQ6ULP2 937 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ISLR2Q6UXK2 745 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TRIM72Q6ZMU5 477 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 RIPOR1Q6ZS17 1223 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 GOT1L1Q8NHS2 421 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF507Q8TCN5 953 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 RFFLQ8WZ73 363 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MTFMTQ96DP5 389 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 C17orf62Q9BQA9 187 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 EBF3Q9H4W6 596 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 DLGAP4Q9Y2H0 992 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 J3QRK9 145 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 RGS10O43665 173 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 FNTBP49356 437 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TPMTP51580 245 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 GRAPQ13588 217 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ABCB5Q2M3G0 1257 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 CCDC24Q8N4L8 307 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC25A41Q8N5S1 370 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ATP6V0D2Q8N8Y2 350 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 SIMC1Q8NDZ2 872 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 GRAPLQ8TC17 118 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MCOLN3Q8TDD5 553 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 DENND1AQ8TEH3 1009 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 DEPDC1BQ8WUY9 529 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 RORBQ92753 470 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TESCQ96BS2 214 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 FBXL8Q96CD0 374 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 RADILQ96JH8 1075 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 SPRTNQ9H040 489 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 IFT46Q9NQC8 304 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 POLR3EQ9NVU0 708 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 STARD13Q9Y3M8 1113 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 SPATA31A5Q5VU36 1347 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 SPATA31A7Q8IWB4 1347 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TRAV6A0A075B6T7 132 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 H3BSA7 217 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 PLSCR1O15162 318 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TADA2AO75478 443 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ANXA6P08133 673 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MAGEA4P43358 317 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 BIKQ13323 160 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 POLD3Q15054 466 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 EXOC3L4Q17RC7 722 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF284Q2VY69 593 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 UBE2UQ5VVX9 321 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 WDR49Q8IV35 697 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 PLPP6Q8IY26 295 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 AVL9Q8NBF6 648 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC4A11Q8NBS3 891 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 GIMAP5Q96F15 307 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ZFP42Q96MM3 310 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 RMDN3Q96TC7 470 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TBC1D22BQ9NU19 505 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TMLHEQ9NVH6 421 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MORF4L1Q9UBU8 362 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MAN1B1Q9UKM7 699 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ITM2AO43736 263 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 JAK2O60674 1132 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 DDAH1O94760 285 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TTLL1O95922 423 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 IL1R1P14778 569 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 RXRAP19793 462 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MAOBP27338 520 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 UQCRC1P31930 480 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TRIM28Q13263 835 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 NCOA4Q13772 614 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 HLFQ16534 295 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 Q3C1V9 767 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MEI1Q5TIA1 1274 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 SWSAP1Q6NVH7 229 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 RBM43Q6ZSC3 357 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 LILRB2Q8N423 598 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 FAM172AQ8WUF8 416 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 DLG3Q92796 817 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 ELMO2Q96JJ3 720 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MCMBPQ9BTE3 642 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TTPALQ9BTX7 342 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 TMEM120AQ9BXJ8 343 aa6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 PAQR5Q9NXK6 330 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 MTF2Q9Y483 593 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-201ENST00000257290 GMFGO60234 142 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 KITP10721 976 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms