RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SIRPGQ9P1W8 387 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 PCDH10Q9P2E7 1040 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 RPS6KL1Q9Y6S9 549 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 KLF11O14901 512 aa19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 CXCR3P49682 368 aa19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 GTF2A1P52655 376 aaPredicted RBP19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 TEX44Q53QW1 395 aa19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 FAM171BQ6P995 826 aa19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 CYS1Q717R9 158 aa19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 ZNF598Q86UK7 904 aaKnown RBP19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 NUDCD3Q8IVD9 361 aa19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 RNF34Q969K3 372 aa19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 MLPHQ9BV36 600 aaPredicted RBP19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 UBP1Q9NZI7 540 aa19.14■□□□□ 0.66
PDLIM4-201ENST00000253754 ATP5HO75947 161 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 TGDSO95455 350 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 SRGAP2BP0DMP2 458 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 KITP10721 976 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 BFSP2Q13515 415 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 HSF5Q4G112 596 aaPredicted RBP19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 SWT1Q5T5J6 900 aaKnown RBP19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 SLC24A5Q71RS6 500 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 MAGEC3Q8TD91 643 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 DQX1Q8TE96 717 aaKnown RBP19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 CDKL2Q92772 493 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 APBB2Q92870 758 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 SKA1Q96BD8 255 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 ATXN7L3BQ96GX2 97 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 PKMYT1Q99640 499 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 ACBD6Q9BR61 282 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 TBC1D10AQ9BXI6 508 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 ARL8BQ9NVJ2 186 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 EMCNQ9ULC0 261 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 TET1Q8NFU7 2136 aa19.14■□□□□ 0.65
PDLIM4-201ENST00000253754 AP2A1O95782 977 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 NFKB1P19838 968 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 GARSP41250 739 aaKnown RBP19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 HCAR3P49019 387 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 PDE1CQ14123 709 aaPredicted RBP19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 PPM1JQ5JR12 505 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 PM20D1Q6GTS8 502 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 TIFABQ6ZNK6 161 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 PDZD4Q76G19 769 aaPredicted RBP19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 ALYREFQ86V81 257 aaKnown RBP19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 LINC01599Q8WXQ3 324 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 SEZ6LQ9BYH1 1024 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 ZFATQ9P243 1243 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 NBNO60934 754 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 GSRP00390 522 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 BPGMP07738 259 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 ITGA2BP08514 1039 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 GALNT2Q10471 571 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 CERCAMQ5T4B2 595 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 ARHGAP36Q6ZRI8 547 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 LONP2Q86WA8 852 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 METTL23Q86XA0 190 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 ARID3BQ8IVW6 561 aaPredicted RBP19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 DNAAF3Q8N9W5 541 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 RSPH1Q8WYR4 309 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 AZIN2Q96A70 460 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 CERS2Q96G23 380 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 EPAS1Q99814 870 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 SIK2Q9H0K1 926 aa19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 DMAP1Q9NPF5 467 aaPredicted RBP19.13■□□□□ 0.65
PDLIM4-201ENST00000253754 B4GALT3O60512 393 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 HAUS5O94927 633 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 F9P00740 461 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 POLBP06746 335 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 OR4Q2P0C623 313 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 ABCG1P45844 678 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 OCRLQ01968 901 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 ZBTB16Q05516 673 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 N4BP2L1Q5TBK1 243 aaPredicted RBP19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 OVOS1Q6IE37 1185 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 RWDD4Q6NW29 188 aaKnown RBP19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 USP33Q8TEY7 942 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 ZNF669Q96BR6 464 aaPredicted RBP19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 GEMIN8Q9NWZ8 242 aaKnown RBP19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 ARMCX1Q9P291 453 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 NUDT5Q9UKK9 219 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 VANGL2Q9ULK5 521 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 MTO1Q9Y2Z2 717 aaKnown RBP19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 MSI1O43347 362 aaKnown RBP19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 IL1BP01584 269 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 TPH1P17752 444 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 RPL10AP62906 217 aaKnown RBP19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 GRIK3Q13003 919 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 INPP5DQ92835 1189 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 HDAC11Q96DB2 347 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 C7orf26Q96N11 449 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 RAB3IPQ96QF0 476 aaPredicted RBP19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 AGAP2Q99490 1192 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 GBA3Q9H227 469 aa19.12■□□□□ 0.65
PDLIM4-201ENST00000253754 ATP9BO43861 1147 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 JCHAINP01591 159 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 CYP11A1P05108 521 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 CNTFP26441 200 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 SLC8A1P32418 973 aa19.11■□□□□ 0.65
PDLIM4-201ENST00000253754 TUSC3Q13454 348 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms