RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PAQR9Q6ZVX9 377 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ARMCX6Q7L4S7 300 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GPR141Q7Z602 305 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 LRRC43Q8N309 656 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GSTCDQ8NEC7 633 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF419Q96HQ0 510 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 CLMNQ96JQ2 1002 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF778Q96MU6 729 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TMEM121Q9BTD3 319 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 MUC13Q9H3R2 512 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF385DQ9H6B1 395 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 LRRC40Q9H9A6 602 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TRPC7Q9HCX4 862 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SLCO1B3Q9NPD5 702 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RSL24D1Q9UHA3 163 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GINS2Q9Y248 185 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 HBS1LQ9Y450 684 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 AK5Q9Y6K8 562 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GOLGA8RI6L899 631 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 NOP56O00567 594 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SNAI1O95863 264 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FYNP06241 537 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PPARGP37231 505 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 CSE1LP55060 971 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TNK2Q07912 1038 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 BST1Q10588 318 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FASTKD1Q53R41 847 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 DALRD3Q5D0E6 543 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 LMBRD2Q68DH5 695 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 MPZL3Q6UWV2 235 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 LINC00523Q86TU6 105 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PGBD3Q8N328 593 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PDPRQ8NCN5 879 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ACTRT2Q8TDY3 377 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 EME1Q96AY2 570 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 MPP4Q96JB8 637 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 APOL6Q9BWW8 343 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RNPEPQ9H4A4 650 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GID8Q9NWU2 228 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RNF181Q9P0P0 153 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 EMCNQ9ULC0 261 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GNEQ9Y223 722 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FAM50BQ9Y247 325 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 MYRFQ9Y2G1 1151 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PCDHA11Q9Y5I1 949 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 BCLAF3A2AJT9 711 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GOLGA8CPA6NN73 597 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PIRO00625 290 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RFPL1O75677 317 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PDE5AO76074 875 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TRUB2O95900 331 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 DLDP09622 509 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ZSCAN5DPP0CG00 497 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ZCCHC18P0CG32 403 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 HOXB8P17481 243 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PHKA2P46019 1235 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ALDH1A3P47895 512 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ADARP55265 1226 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PHEXP78562 749 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 NIPAL4Q0D2K0 466 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SLC10A2Q12908 348 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RPS6KA2Q15349 733 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SPATS1Q496A3 300 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RAPH1Q70E73 1250 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ARMCX2Q7L311 632 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PQLC1Q8N2U9 271 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FBXW8Q8N3Y1 598 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 FAM71DQ8N9W8 422 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 DDHD1Q8NEL9 900 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ARNTL2Q8WYA1 636 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ABTB1Q969K4 478 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PPWD1Q96BP3 646 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 THAP11Q96EK4 314 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SIGLEC10Q96LC7 697 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 GAS2L1Q99501 681 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF670Q9BS34 389 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 MTMR12Q9C0I1 747 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TRPV6Q9H1D0 765 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RCOR3Q9P2K3 495 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 USP18Q9UMW8 372 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 DERAQ9Y315 318 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RGSL1A5PLK6 1076 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 M0QYV0 167 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 CXCL11O14625 94 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 MDM4O15151 490 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TSPAN1O60635 241 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 IGLV3-25P01717 112 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 APRTP07741 180 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 NFICP08651 508 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PDGFRAP16234 1089 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SSTR1P30872 391 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 TCF7P36402 384 aaPredicted RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PPIDQ08752 370 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 PDAP1Q13442 181 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 LLGL1Q15334 1064 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 CNPY1Q3B7I2 92 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 SEL1L3Q68CR1 1132 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 KCTD11Q693B1 232 aa4.24□□□□□ -1.73
UBE4A-201ENST00000252108 RWDD4Q6NW29 188 aaKnown RBP4.24□□□□□ -1.73
UBE4A-201ENST00000252108 CDHR3Q6ZTQ4 885 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms