RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DCLK2Q8N568 766 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 DNAAF3Q8N9W5 541 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 TRPV1Q8NER1 839 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 MFSD3Q96ES6 412 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 RBBP8Q99708 897 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 APBA2Q99767 749 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 APOL2Q9BQE5 337 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 SNX15Q9NRS6 342 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 DNAJC16Q9Y2G8 782 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 COL4A4P53420 1690 aaPredicted RBP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 B2RBV5 119 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 NFKB1P19838 968 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 KPNB1Q14974 876 aaKnown RBP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 ACSBG2Q5FVE4 666 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 PIWIL2Q8TC59 973 aaKnown RBP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 WDR60Q8WVS4 1066 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 RILPQ96NA2 401 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 MYCBPQ99417 103 aaPredicted RBP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 SENP6Q9GZR1 1112 aaPredicted RBP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 AGO3Q9H9G7 860 aaKnown RBP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 BFARQ9NZS9 450 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 USP1O94782 785 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 F9P00740 461 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 AKR1A1P14550 325 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 TUBB3Q13509 450 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 RCN2Q14257 317 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 GPR162Q16538 588 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 INSCQ1MX18 579 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 ANKRD20A4Q4UJ75 823 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 INTS6LQ5JSJ4 861 aaKnown RBP19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 GNASQ5JWF2 1037 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 C17orf99Q6UX52 265 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 STRA8Q7Z7C7 330 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 TAC4Q86UU9 113 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 ZSCAN18Q8TBC5 510 aaPredicted RBP19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 DPF3Q92784 378 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 CELF6Q96J87 481 aaKnown RBP19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 SORT1Q99523 831 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 CXorf56Q9H5V9 222 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 DCLRE1BQ9H816 532 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 COPG2Q9UBF2 871 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 PRR5-ARHGAP8B1AHC4 643 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 ATP9BO43861 1147 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 SERPINA6P08185 405 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 BDNFP23560 247 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 MAGEA12P43365 314 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 PTDSS1P48651 473 aaKnown RBP19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 ARHGAP8P85298 464 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 UBAP2LQ14157 1087 aaKnown RBP19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 FSTL4Q6MZW2 842 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 KIRREL3Q8IZU9 778 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 PLD6Q8N2A8 252 aaKnown RBP19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 RBM15BQ8NDT2 890 aaKnown RBP19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 ISL2Q96A47 359 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 EPAS1Q99814 870 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 MMADHCQ9H3L0 296 aaPredicted RBP19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 CHST12Q9NRB3 414 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 TMLHEQ9NVH6 421 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 RRN3Q9NYV6 651 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 UBP1Q9NZI7 540 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 GIT1Q9Y2X7 761 aa19.97■□□□□ 0.79
CDC42EP1-201ENST00000249014 SERPINE1P05121 402 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 MX2P20592 715 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 PCSK1P29120 753 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 ABCG1P45844 678 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 LIMK2P53671 638 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 CLNS1AP54105 237 aaKnown RBP19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 KDSRQ06136 332 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 HSP90AA5PQ58FG0 334 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 PM20D1Q6GTS8 502 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 MAVSQ7Z434 540 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 WDR75Q8IWA0 830 aaKnown RBP19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 BRD8Q9H0E9 1235 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 CHRAC1Q9NRG0 131 aa19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 TDRD15B5MCY1 1934 aaKnown RBP19.96■□□□□ 0.79
CDC42EP1-201ENST00000249014 MTSS1O43312 755 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 DUSP11O75319 330 aaKnown RBP19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 TPH1P17752 444 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 BRCC3P46736 316 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 HUNKP57058 714 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 FAM171BQ6P995 826 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 TMPRSS6Q8IU80 811 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 MTG1Q9BT17 334 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 CAB39LQ9H9S4 337 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 TAGLN3Q9UI15 199 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 TRHDEQ9UKU6 1024 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 ARHGAP42A6NI28 874 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 ERI2A8K979 691 aaKnown RBP19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 ZNF189O75820 626 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 PGK1P00558 417 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 POMCP01189 267 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 JCHAINP01591 159 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 RPL9P32969 192 aaKnown RBP19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 PGM1P36871 562 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 MAB21L3Q8N8X9 362 aa19.95■□□□□ 0.78
CDC42EP1-201ENST00000249014 HASPINQ8TF76 798 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms