RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 GJA4P35212 333 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 KCTD19Q17RG1 926 aaPredicted RBP20.68■□□□□ 0.9
SNRPA-201ENST00000243563 MPP7Q5T2T1 576 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 TMCO3Q6UWJ1 677 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 ARHGAP36Q6ZRI8 547 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 MFN1Q8IWA4 741 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 SFTPA1Q8IWL2 248 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 CPA6Q8N4T0 437 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.68■□□□□ 0.9
SNRPA-201ENST00000243563 NXPE3Q969Y0 559 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 NECAB3Q96P71 396 aaPredicted RBP20.68■□□□□ 0.9
SNRPA-201ENST00000243563 MAK16Q9BXY0 300 aaKnown RBP20.68■□□□□ 0.9
SNRPA-201ENST00000243563 SLC39A8Q9C0K1 460 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 LRRC19Q9H756 370 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 DTLQ9NZJ0 730 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 TBC1D30Q9Y2I9 924 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 H0Y626 953 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 CES2O00748 559 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 CACNG3O60359 315 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 URI1O94763 535 aaPredicted RBP20.67■□□□□ 0.9
SNRPA-201ENST00000243563 HLA-FP30511 346 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 ACVRL1P37023 503 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 OPRD1P41143 372 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 GAD2Q05329 585 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 LMAN2Q12907 356 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 ITPRIPL2Q3MIP1 535 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 OR7D4Q8NG98 312 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 ATG4AQ8WYN0 398 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 ALG14Q96F25 216 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 INTS6Q9UL03 887 aaKnown RBP20.67■□□□□ 0.9
SNRPA-201ENST00000243563 EFR3BQ9Y2G0 817 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 HEY1Q9Y5J3 304 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.67■□□□□ 0.9
SNRPA-201ENST00000243563 ANTXRLA6NF34 631 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 TUBB4AP04350 444 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 CISD3P0C7P0 127 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 CSKP41240 450 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 MAPKAPK2P49137 400 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 ZNF177Q13360 481 aaPredicted RBP20.67■□□□□ 0.9
SNRPA-201ENST00000243563 TDGQ13569 410 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 TFDP2Q14188 446 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 LONRF2Q1L5Z9 754 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 APCDD1Q8J025 514 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 UMODL1-AS1Q8N2C9 162 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 KIF18AQ8NI77 898 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 FIBINQ8TAL6 211 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 ACTRT1Q8TDG2 376 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 HMCESQ96FZ2 354 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 AP1M1Q9BXS5 423 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 C10orf88Q9H8K7 445 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 FBXO10Q9UK96 956 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 TTC7AQ9ULT0 858 aaPredicted RBP20.67■□□□□ 0.9
SNRPA-201ENST00000243563 OR51B4Q9Y5P0 310 aa20.67■□□□□ 0.9
SNRPA-201ENST00000243563 TYW5A2RUC4 315 aaKnown RBP20.66■□□□□ 0.9
SNRPA-201ENST00000243563 SHISA7A6NL88 538 aa20.66■□□□□ 0.9
SNRPA-201ENST00000243563 TULP3O75386 442 aa20.66■□□□□ 0.9
SNRPA-201ENST00000243563 RHOCP08134 193 aa20.66■□□□□ 0.9
SNRPA-201ENST00000243563 GLDCP23378 1020 aa20.66■□□□□ 0.9
SNRPA-201ENST00000243563 OTUD4Q01804 1114 aaKnown RBP20.66■□□□□ 0.9
SNRPA-201ENST00000243563 CDH18Q13634 790 aa20.66■□□□□ 0.9
SNRPA-201ENST00000243563 RNF219Q5W0B1 726 aaPredicted RBP20.66■□□□□ 0.9
SNRPA-201ENST00000243563 PHTF2Q8N3S3 785 aa20.66■□□□□ 0.9
SNRPA-201ENST00000243563 FBRSL1Q9HCM7 1045 aaKnown RBP20.66■□□□□ 0.9
SNRPA-201ENST00000243563 HEBP1Q9NRV9 189 aa20.66■□□□□ 0.9
SNRPA-201ENST00000243563 ABCB8Q9NUT2 735 aa20.66■□□□□ 0.9
SNRPA-201ENST00000243563 DNAJC17Q9NVM6 304 aaKnown RBP20.66■□□□□ 0.9
SNRPA-201ENST00000243563 VCANP13611 3396 aa20.66■□□□□ 0.9
SNRPA-201ENST00000243563 MUC22E2RYF6 1773 aaPredicted RBP20.66■□□□□ 0.9
SNRPA-201ENST00000243563 RASA4BC9J798 803 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 PGRMC1O00264 195 aaKnown RBP20.65■□□□□ 0.9
SNRPA-201ENST00000243563 RASA4O43374 803 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 TJP3O95049 919 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 CETN2P41208 172 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 GNA12Q03113 381 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 KDSRQ06136 332 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 TMEM215Q68D42 235 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 TXNDC11Q6PKC3 985 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 ACTL9Q8TC94 416 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 C1orf54Q8WWF1 131 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 OLFM3Q96PB7 478 aa20.65■□□□□ 0.9
SNRPA-201ENST00000243563 APOC4-APOC2K7ER74 178 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 DFFAO00273 331 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 APOC2P02655 101 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 TGM2P21980 687 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 NOMO1Q15155 1222 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 GEN1Q17RS7 908 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 FUT11Q495W5 492 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 RNF135Q8IUD6 432 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 PRELID2Q8N945 189 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 CSGALNACT1Q8TDX6 532 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 ARHGEF2Q92974 986 aaKnown RBP20.64■□□□□ 0.9
SNRPA-201ENST00000243563 RRAGDQ9NQL2 400 aaPredicted RBP20.64■□□□□ 0.9
SNRPA-201ENST00000243563 CDC23Q9UJX2 597 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 MRFAP1Q9Y605 127 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 ACTL7AQ9Y615 435 aa20.64■□□□□ 0.9
SNRPA-201ENST00000243563 RAMP2O60895 175 aa20.64■□□□□ 0.89
SNRPA-201ENST00000243563 SRFP11831 508 aa20.64■□□□□ 0.89
SNRPA-201ENST00000243563 PAPOLAP51003 745 aaKnown RBP20.64■□□□□ 0.89
SNRPA-201ENST00000243563 C6orf118Q5T5N4 469 aa20.64■□□□□ 0.89
SNRPA-201ENST00000243563 SETD3Q86TU7 594 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms