RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SMYD2Q9NRG4 433 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 BFARQ9NZS9 450 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 USP15Q9Y4E8 981 aaPredicted RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 CEP350Q5VT06 3117 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 WASH4PA8MWX3 477 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 OAS1P00973 400 aaKnown RBP23.81■■□□□ 1.4
MSX2-201ENST00000239243 HAPLN1P10915 354 aaPredicted RBP23.81■■□□□ 1.4
MSX2-201ENST00000239243 NFKB1P19838 968 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 FOXN2P32314 431 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 CD68P34810 354 aaPredicted RBP23.81■■□□□ 1.4
MSX2-201ENST00000239243 CCL23P55773 120 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 SLC39A5Q6ZMH5 540 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 MARK2Q7KZI7 788 aaKnown RBP23.81■■□□□ 1.4
MSX2-201ENST00000239243 ARHGAP12Q8IWW6 846 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 TTC9BQ8N6N2 239 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 STKLD1Q8NE28 680 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 TOX2Q96NM4 488 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 SEPT5Q99719 369 aaPredicted RBP23.81■■□□□ 1.4
MSX2-201ENST00000239243 LRRC40Q9H9A6 602 aa23.81■■□□□ 1.4
MSX2-201ENST00000239243 FNDC1Q4ZHG4 1894 aaPredicted RBP23.81■■□□□ 1.4
MSX2-201ENST00000239243 GOLGA8RI6L899 631 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 JCHAINP01591 159 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 CSH1P0DML2 217 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 CSH2P0DML3 217 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 DNAJB2P25686 324 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 CRYMQ14894 314 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 SPANXN3Q5MJ09 141 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 ATP6V0D2Q8N8Y2 350 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 SERAC1Q96JX3 654 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 CEP295NLQ96MC4 621 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 GORASP1Q9BQQ3 440 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 PITPNM3Q9BZ71 974 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 CASS4Q9NQ75 786 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.8■■□□□ 1.4
MSX2-201ENST00000239243 SYBUQ9NX95 663 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 HCSTQ9UBK5 93 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 SCN5AQ14524 2016 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 NT5C1B-RDH14C9J2C7 533 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 ALADP13716 330 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 ATN1P54259 1190 aaPredicted RBP23.8■■□□□ 1.4
MSX2-201ENST00000239243 MTA1Q13330 715 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 ZKSCAN8Q15776 578 aaPredicted RBP23.8■■□□□ 1.4
MSX2-201ENST00000239243 RNF19BQ6ZMZ0 732 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 SH2D5Q6ZV89 423 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 SPATA21Q7Z572 469 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 OXNAD1Q96HP4 312 aaPredicted RBP23.8■■□□□ 1.4
MSX2-201ENST00000239243 VPS11Q9H270 941 aa23.8■■□□□ 1.4
MSX2-201ENST00000239243 AAR2Q9Y312 384 aaKnown RBP23.8■■□□□ 1.4
MSX2-201ENST00000239243 CCNB1P14635 433 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 ALDH7A1P49419 539 aaKnown RBP23.79■■□□□ 1.4
MSX2-201ENST00000239243 TRIP4Q15650 581 aaPredicted RBP23.79■■□□□ 1.4
MSX2-201ENST00000239243 NAPEPLDQ6IQ20 393 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 LINC00523Q86TU6 105 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 DNAAF3Q8N9W5 541 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 OR52K1Q8NGK4 314 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 ZSCAN18Q8TBC5 510 aaPredicted RBP23.79■■□□□ 1.4
MSX2-201ENST00000239243 KLF6Q99612 283 aaPredicted RBP23.79■■□□□ 1.4
MSX2-201ENST00000239243 TRIM56Q9BRZ2 755 aaKnown RBP23.79■■□□□ 1.4
MSX2-201ENST00000239243 PPP1R12CQ9BZL4 782 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 IQCGQ9H095 443 aaKnown RBP23.79■■□□□ 1.4
MSX2-201ENST00000239243 VANGL2Q9ULK5 521 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 SLC27A5Q9Y2P5 690 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 SHROOM3Q8TF72 1996 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 NUP205Q92621 2012 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.79■■□□□ 1.4
MSX2-201ENST00000239243 MAGEB16A2A368 324 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 ANKRD65E5RJM6 399 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 PYGBP11216 843 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 NPY2RP49146 381 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 CRADDP78560 199 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 HTRA3P83110 453 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 EFEMP1Q12805 493 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 TAF10Q12962 218 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 KDM4CQ9H3R0 1056 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 BRCA2P51587 3418 aa23.79■■□□□ 1.4
MSX2-201ENST00000239243 COPEO14579 308 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 MATN3O15232 486 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 CACNG3O60359 315 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 NEK3P51956 506 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 DNAJC3Q13217 504 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 AFMIDQ63HM1 303 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 RSPO2Q6UXX9 243 aaPredicted RBP23.78■■□□□ 1.4
MSX2-201ENST00000239243 KLHDC8BQ8IXV7 354 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 GPR152Q8TDT2 470 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 BTN2A3PQ96KV6 586 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 BEGAINQ9BUH8 593 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 MLPHQ9BV36 600 aaPredicted RBP23.78■■□□□ 1.4
MSX2-201ENST00000239243 SLC39A8Q9C0K1 460 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 MKS1Q9NXB0 559 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 PPARGC1AQ9UBK2 798 aaKnown RBP23.78■■□□□ 1.4
MSX2-201ENST00000239243 STARD13Q9Y3M8 1113 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 MAFKO60675 156 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 NIPAL4Q0D2K0 466 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 USP41Q3LFD5 358 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 PIK3R6Q5UE93 754 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 TMEM173Q86WV6 379 aaPredicted RBP23.78■■□□□ 1.4
MSX2-201ENST00000239243 IL12RB2Q99665 862 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 PIH1D1Q9NWS0 290 aaKnown RBP23.78■■□□□ 1.4
MSX2-201ENST00000239243 GRID1Q9ULK0 1009 aa23.78■■□□□ 1.4
MSX2-201ENST00000239243 ARL2BPQ9Y2Y0 163 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms