RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 KCNU1A8MYU2 1149 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 PI15O43692 258 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 TTC4O95801 387 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 IFNB1P01574 187 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 OR4Q2P0C623 313 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 MYZAPP0CAP1 466 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 GOT1P17174 413 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 PFKLP17858 780 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 FDFT1P37268 417 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 GGCXP38435 758 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 ARL4CP56559 192 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 SARNPP82979 210 aaKnown RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 GABPB1Q06547 395 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 PRKD1Q15139 912 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 LLGL1Q15334 1064 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 TRIP4Q15650 581 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 UNC45BQ8IWX7 931 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 TCEAL8Q8IYN2 117 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 ATP6V0D2Q8N8Y2 350 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 TSEN2Q8NCE0 465 aaKnown RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 MCUQ8NE86 351 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 ITFG1Q8TB96 612 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 UBLCP1Q8WVY7 318 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 NDRG1Q92597 394 aaKnown RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 EXOC4Q96A65 974 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 AZIN2Q96A70 460 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 HDAC11Q96DB2 347 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 SLC39A13Q96H72 371 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 BTN2A3PQ96KV6 586 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 ZIM3Q96PE6 472 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 CCDC77Q9BR77 488 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 TKTL2Q9H0I9 626 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 EIF2B3Q9NR50 452 aaKnown RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 GPATCH2LQ9NWQ4 482 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 DTLQ9NZJ0 730 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 CALCOCO1Q9P1Z2 691 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 PPARGC1AQ9UBK2 798 aaKnown RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 FETUBQ9UGM5 382 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 PLAAQ9Y263 795 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 ATP8A1Q9Y2Q0 1164 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 HEY1Q9Y5J3 304 aa13.57□□□□□ -0.24
SLIRP-201ENST00000238688 RIF1Q5UIP0 2472 aaKnown RBP13.57□□□□□ -0.24
SLIRP-201ENST00000238688 F5P12259 2224 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 A0A1W2PQH9 124 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 ERI2A8K979 691 aaKnown RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 AGPSO00116 658 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 AP3B1O00203 1094 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 NRG2O14511 850 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 SEC24AO95486 1093 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 IGLV3-27P01718 113 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 TPSB2P20231 275 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 FSHRP23945 695 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 OAS2P29728 719 aaKnown RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 ATP5DP30049 168 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 RPL22P35268 128 aaKnown RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 ALDH1A3P47895 512 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 PTPN5P54829 565 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 IFFO1Q0D2I5 559 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 RASA2Q15283 850 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 TPSAB1Q15661 275 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 UAP1Q16222 522 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 HIF1AQ16665 826 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 RAB6CQ53S08 254 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 AGBL2Q5U5Z8 902 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 EMC10Q5UCC4 262 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 MANEALQ5VSG8 457 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 ITIH5Q86UX2 942 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 PDIK1LQ8N165 341 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 RIBC1Q8N443 379 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 ARFGAP2Q8N6H7 521 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 FAM71DQ8N9W8 422 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 EDEM1Q92611 657 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 PRCCQ92733 491 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 FGF14Q92915 247 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 NXPE3Q969Y0 559 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 TBC1D31Q96DN5 1066 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 PGM2Q96G03 612 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 RBM15Q96T37 977 aaKnown RBP eCLIP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 SEPT5Q99719 369 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 PRRX2Q99811 253 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 RAB6CQ9H0N0 254 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 TRHDEQ9UKU6 1024 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 NFS1Q9Y697 457 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 NUMBLQ9Y6R0 609 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 PTPRZ1P23471 2315 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-201ENST00000238688 FANCMQ8IYD8 2048 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 FAM186AA6NE01 2351 aa13.56□□□□□ -0.24
SLIRP-201ENST00000238688 DENND4CQ5VZ89 1909 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 A0A0A0MRY4 1105 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 SLC38A8A6NNN8 435 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 E7ESA3 106 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 KCNN4O15554 427 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 RIPK2O43353 540 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 GALR2O43603 387 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms