RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PIK3R6Q5UE93 754 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 C14orf80Q86SX3 495 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 CCDC13Q8IYE1 715 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 BBOF1Q8ND07 529 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 TSC1Q92574 1164 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 ELSPBP1Q96BH3 223 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 PEBP4Q96S96 227 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 PNKPQ96T60 521 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 RBM22Q9NW64 420 aaKnown RBP eCLIP11.4□□□□□ -0.582e-9■■■■■ 44.3
TNFAIP3-201ENST00000237289 EFCAB8A8MWE9 144 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 TDGQ13569 410 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 CASC4Q6P4E1 433 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 BBS12Q6ZW61 710 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 SETD3Q86TU7 594 aaPredicted RBP11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 METTL3Q86U44 580 aaKnown RBP11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 TMEM25Q86YD3 366 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 OTUD6BQ8N6M0 293 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 FAF2Q96CS3 445 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 AGAP3Q96P47 875 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 C8orf33Q9H7E9 229 aaPredicted RBP11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 BCCIPQ9P287 314 aaKnown RBP eCLIP11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 ECI2O75521 394 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 SCAPQ12770 1279 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 SFSWAPQ12872 951 aaKnown RBP11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 LEXMQ3ZCV2 418 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 RAB6CQ53S08 254 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 PRSS36Q5K4E3 855 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 CCDC25Q86WR0 208 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 SLC39A13Q96H72 371 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 RAB6CQ9H0N0 254 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 EFR3BQ9Y2G0 817 aa11.4□□□□□ -0.58
TNFAIP3-201ENST00000237289 F5H423 210 aaPredicted RBP11.4□□□□□ -0.59
TNFAIP3-201ENST00000237289 ZNF252P-AS1Q0IIN9 211 aa11.4□□□□□ -0.59
TNFAIP3-201ENST00000237289 TRNP1Q6NT89 227 aa11.4□□□□□ -0.59
TNFAIP3-201ENST00000237289 AADACL2Q6P093 401 aa11.4□□□□□ -0.59
TNFAIP3-201ENST00000237289 ACTRT1Q8TDG2 376 aa11.4□□□□□ -0.59
TNFAIP3-201ENST00000237289 NT5MQ9NPB1 228 aa11.4□□□□□ -0.59
TNFAIP3-201ENST00000237289 SMARCAL1Q9NZC9 954 aa11.4□□□□□ -0.59
TNFAIP3-201ENST00000237289 SEPT3Q9UH03 358 aa11.4□□□□□ -0.59
TNFAIP3-201ENST00000237289 RAD54BQ9Y620 910 aa11.4□□□□□ -0.59
TNFAIP3-201ENST00000237289 HACD1B0YJ81 288 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 C2CD4DB7Z1M9 353 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 PHF2O75151 1096 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 CDKN2BP42772 138 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 NDST2P52849 883 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM71DQ8N9W8 422 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 OR7D4Q8NG98 312 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 ATG4AQ8WYN0 398 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 P2RY13Q9BPV8 354 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 DPH5Q9H2P9 285 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 TCRBV5S1A1TA0A578 114 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 ILVBLA1L0T0 632 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 KRT14P02533 472 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 ARSAP15289 507 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 SCNN1BP51168 640 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC12A1Q13621 1099 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 CCNG2Q16589 344 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 P3H1Q32P28 736 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 NPNTQ6UXI9 565 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 IFT20Q8IY31 132 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 CPXM2Q8N436 756 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 GPR161Q8N6U8 529 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 CD101Q93033 1021 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 NT5C3BQ969T7 300 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 GUCD1Q96NT3 240 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 PPP1R2P1Q96PQ5 205 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 KCNK12Q9HB15 430 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 GTSE1Q9NYZ3 720 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 SAE1Q9UBE0 346 aaPredicted RBP11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 PIAS3Q9Y6X2 628 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 ALPK3Q96L96 1907 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 MAN2B1O00754 1011 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 DDX3YO15523 660 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 CNTN5O94779 1100 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 CSKP41240 450 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 CTC1Q2NKJ3 1217 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 CEP128Q6ZU80 1094 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 DSG4Q86SJ6 1040 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 PCDH19Q8TAB3 1148 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 RMDN1Q96DB5 314 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 PPARGC1AQ9UBK2 798 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 GGA2Q9UJY4 613 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 ANK1P16157 1881 aa11.39□□□□□ -0.59
TNFAIP3-201ENST00000237289 KCNK1O00180 336 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 CES2O00748 559 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 TIMM44O43615 452 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 IGSF6O95976 241 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 KCNJ1P48048 391 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 PAPOLAP51003 745 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 MAP9Q49MG5 647 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 AHI1Q8N157 1196 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 NETO2Q8NC67 525 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 SPATA4Q8NEY3 305 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 IGSF8Q969P0 613 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC2A11Q9BYW1 496 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 RETREG1Q9H6L5 497 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 SCUBE2Q9NQ36 999 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 C3orf70A6NLC5 250 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 MMP13P45452 471 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 ARSEP51690 589 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms