RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 PTBP1P26599 531 aaKnown RBP eCLIP8.55□□□□□ -1.04
SPARC-201ENST00000231061 NOS3P29474 1203 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 MFAP3P55082 362 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 SPIRE1Q08AE8 756 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 STARD3Q14849 445 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 TARBP2Q15633 366 aaKnown RBP8.55□□□□□ -1.04
SPARC-201ENST00000231061 NAA35Q5VZE5 725 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 CASC4Q6P4E1 433 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 TRAF7Q6Q0C0 670 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 SLC22A25Q6T423 547 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 SLC30A10Q6XR72 485 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 STXBP4Q6ZWJ1 553 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 FRMD5Q7Z6J6 570 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 FBXO11Q86XK2 927 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 WDR49Q8IV35 697 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 CEP76Q8TAP6 659 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 ENKURQ8TC29 256 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 GRIN3AQ8TCU5 1115 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 UBLCP1Q8WVY7 318 aaPredicted RBP8.55□□□□□ -1.04
SPARC-201ENST00000231061 PTPRN2Q92932 1015 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 ASB2Q96Q27 587 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 NUDCD1Q96RS6 583 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 TRIM31Q9BZY9 425 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 BCAS3Q9H6U6 928 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 ZNF275Q9NSD4 429 aaPredicted RBP8.55□□□□□ -1.04
SPARC-201ENST00000231061 PGRMC1O00264 195 aaKnown RBP8.55□□□□□ -1.04
SPARC-201ENST00000231061 AKAP3O75969 853 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 RAB14P61106 215 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 PM20D1Q6GTS8 502 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 KLHL35Q6PF15 583 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 NKAIN4Q8IVV8 208 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 ELMOD1Q8N336 334 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 MYCT1Q8N699 235 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 OR2W6PQ8NHA6 318 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 ADAMTS16Q8TE57 1224 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 PIGOQ8TEQ8 1089 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 AMNQ9BXJ7 453 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 TAF1DQ9H5J8 278 aaPredicted RBP8.55□□□□□ -1.04
SPARC-201ENST00000231061 ARMC7Q9H6L4 198 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 CAAP1Q9H8G2 361 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 NAGPAQ9UK23 515 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 NOC2LQ9Y3T9 749 aaKnown RBP8.55□□□□□ -1.04
SPARC-201ENST00000231061 CHTOPQ9Y3Y2 248 aaKnown RBP8.55□□□□□ -1.04
SPARC-201ENST00000231061 COMMD3-BMI1R4GMX3 469 aa8.55□□□□□ -1.04
SPARC-201ENST00000231061 PITPNM2Q9BZ72 1349 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 ATMINO43313 823 aaPredicted RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 DNAJB6O75190 326 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 CLUP10909 449 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 ABCB4P21439 1286 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 CSTF2P33240 577 aaKnown RBP eCLIP8.54□□□□□ -1.04
SPARC-201ENST00000231061 MAPK8P45983 427 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 ATXN1P54253 815 aaKnown RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 CASP6P55212 293 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 P2RX3P56373 397 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 PIN1Q13526 163 aaPredicted RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 GALNT3Q14435 633 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 OR52E8Q6IFG1 317 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 DRICH1Q6PGQ1 229 aaPredicted RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 YTHDF3Q7Z739 585 aaKnown RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 MRPL10Q7Z7H8 261 aaKnown RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 ITIH5Q86UX2 942 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 LINC00518Q8N0U6 118 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 CEP19Q96LK0 163 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 CCDC17Q96LX7 622 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 RUSC1Q9BVN2 902 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 DPH5Q9H2P9 285 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 SARS2Q9NP81 518 aaKnown RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 POLR3BQ9NW08 1133 aaPredicted RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 PCDHAC2Q9Y5I4 1007 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 CLRN2A0PK11 232 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 BTN3A1O00481 513 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 PROM1O43490 865 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 GPC4O75487 556 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 CDC123O75794 336 aaPredicted RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 ITGB3P05106 788 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 ITGA2P17301 1181 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 ATP5F1P24539 256 aaPredicted RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 COPS2P61201 443 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 DSC1Q08554 894 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 CTTNQ14247 550 aaKnown RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 IRF2BP2Q7Z5L9 587 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 ADAT2Q7Z6V5 191 aaKnown RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 TMC8Q8IU68 726 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 RAET1EQ8TD07 263 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 DCAF4Q8WV16 495 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 TAMM41Q96BW9 452 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 FAR2Q96K12 515 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 PBKQ96KB5 322 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 RMDN3Q96TC7 470 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 ZSCAN5AQ9BUG6 496 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 CRISPLD2Q9H0B8 497 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 IKZF4Q9H2S9 585 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 TOPORSQ9NS56 1045 aaPredicted RBP8.54□□□□□ -1.04
SPARC-201ENST00000231061 GIMAP4Q9NUV9 329 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 AP4E1Q9UPM8 1137 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 NAALAD2Q9Y3Q0 740 aa8.54□□□□□ -1.04
SPARC-201ENST00000231061 TMEM120BA0PK00 339 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms