RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 ATAD1Q8NBU5 361 aa18.05■□□□□ 0.48
GCDH-201ENST00000222214 FBXO32Q969P5 355 aa18.05■□□□□ 0.48
GCDH-201ENST00000222214 OXNAD1Q96HP4 312 aaPredicted RBP18.05■□□□□ 0.48
GCDH-201ENST00000222214 SERAC1Q96JX3 654 aa18.05■□□□□ 0.48
GCDH-201ENST00000222214 AGAP3Q96P47 875 aa18.05■□□□□ 0.48
GCDH-201ENST00000222214 PGLYRP2Q96PD5 576 aa18.05■□□□□ 0.48
GCDH-201ENST00000222214 IQCGQ9H095 443 aaKnown RBP18.05■□□□□ 0.48
GCDH-201ENST00000222214 SMYD2Q9NRG4 433 aa18.05■□□□□ 0.48
GCDH-201ENST00000222214 OSER1Q9NX31 292 aa18.05■□□□□ 0.48
GCDH-201ENST00000222214 AAR2Q9Y312 384 aaKnown RBP18.05■□□□□ 0.48
GCDH-201ENST00000222214 MTMR11A4FU01 709 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 E9PAM4 449 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 COPEO14579 308 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 PQBP1O60828 265 aaKnown RBP18.04■□□□□ 0.48
GCDH-201ENST00000222214 CSH1P0DML2 217 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 CSH2P0DML3 217 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 CD68P34810 354 aaPredicted RBP18.04■□□□□ 0.48
GCDH-201ENST00000222214 CCNFP41002 786 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 PGFP49763 221 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 TBX4P57082 545 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 ZKSCAN8Q15776 578 aaPredicted RBP18.04■□□□□ 0.48
GCDH-201ENST00000222214 CHSY1Q86X52 802 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 ARHGAP12Q8IWW6 846 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 GBP7Q8N8V2 638 aaPredicted RBP18.04■□□□□ 0.48
GCDH-201ENST00000222214 ATP6V0D2Q8N8Y2 350 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 DEFB118Q96PH6 123 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 TTPALQ9BTX7 342 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 HIPK3Q9H422 1215 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 GMIPQ9P107 970 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 VANGL2Q9ULK5 521 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 HS3ST4Q9Y661 456 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 HTTP42858 3142 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.04■□□□□ 0.48
GCDH-201ENST00000222214 TBKBP1A7MCY6 615 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 F5H423 210 aaPredicted RBP18.04■□□□□ 0.48
GCDH-201ENST00000222214 GOLGA8RI6L899 631 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 FSBPO95073 299 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 DHRS4L1P0CG22 281 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 PYGBP11216 843 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 NFKB1P19838 968 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 GPR15P49685 360 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 TUBP50607 506 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 NIPAL4Q0D2K0 466 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 TRPM8Q7Z2W7 1104 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 ZSCAN18Q8TBC5 510 aaPredicted RBP18.04■□□□□ 0.48
GCDH-201ENST00000222214 CELF6Q96J87 481 aaKnown RBP18.04■□□□□ 0.48
GCDH-201ENST00000222214 GORASP1Q9BQQ3 440 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 SYBUQ9NX95 663 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 KLHL14Q9P2G3 628 aa18.04■□□□□ 0.48
GCDH-201ENST00000222214 PPARGC1AQ9UBK2 798 aaKnown RBP18.04■□□□□ 0.48
GCDH-201ENST00000222214 NUP205Q92621 2012 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 ANKRD65E5RJM6 399 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 DFFAO00273 331 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 MATN3O15232 486 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 ANXA9O76027 345 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 JCHAINP01591 159 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 HAPLN1P10915 354 aaPredicted RBP18.03■□□□□ 0.48
GCDH-201ENST00000222214 CCNB1P14635 433 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 ADRA1DP25100 572 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 GATMP50440 423 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 KPNA1P52294 538 aaPredicted RBP18.03■□□□□ 0.48
GCDH-201ENST00000222214 MGAT5Q09328 741 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 TRIP4Q15650 581 aaPredicted RBP18.03■□□□□ 0.48
GCDH-201ENST00000222214 ANO4Q32M45 955 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 MGAT5BQ3V5L5 792 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 SDHAF4Q5VUM1 108 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 AFMIDQ63HM1 303 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 DNAAF3Q8N9W5 541 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 ACMSDQ8TDX5 336 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 IL12RB2Q99665 862 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 IL22Q9GZX6 179 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.03■□□□□ 0.48
GCDH-201ENST00000222214 PRKAG3Q9UGI9 489 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 GRID1Q9ULK0 1009 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 PHTF1Q9UMS5 762 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 FNDC1Q4ZHG4 1894 aaPredicted RBP18.03■□□□□ 0.48
GCDH-201ENST00000222214 SHROOM3Q8TF72 1996 aa18.03■□□□□ 0.48
GCDH-201ENST00000222214 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.02■□□□□ 0.48
GCDH-201ENST00000222214 MAFKO60675 156 aa18.02■□□□□ 0.48
GCDH-201ENST00000222214 EDF1O60869 148 aaKnown RBP18.02■□□□□ 0.48
GCDH-201ENST00000222214 USP1O94782 785 aa18.02■□□□□ 0.48
GCDH-201ENST00000222214 GSTA1P08263 222 aa18.02■□□□□ 0.48
GCDH-201ENST00000222214 USP46P62068 366 aa18.02■□□□□ 0.48
GCDH-201ENST00000222214 OR52K1Q8NGK4 314 aa18.02■□□□□ 0.48
GCDH-201ENST00000222214 ZNF75CPQ92670 426 aaPredicted RBP18.02■□□□□ 0.48
GCDH-201ENST00000222214 FATE1Q969F0 183 aa18.02■□□□□ 0.48
GCDH-201ENST00000222214 BTN2A3PQ96KV6 586 aa18.02■□□□□ 0.48
GCDH-201ENST00000222214 TOX2Q96NM4 488 aa18.02■□□□□ 0.48
GCDH-201ENST00000222214 FCRL5Q96RD9 977 aa18.02■□□□□ 0.48
GCDH-201ENST00000222214 CDK5RAP1Q96SZ6 601 aaKnown RBP18.02■□□□□ 0.48
GCDH-201ENST00000222214 KLF6Q99612 283 aaPredicted RBP18.02■□□□□ 0.48
GCDH-201ENST00000222214 MOCS2O96007 188 aaPredicted RBP18.02■□□□□ 0.47
GCDH-201ENST00000222214 RHOQP17081 205 aa18.02■□□□□ 0.47
GCDH-201ENST00000222214 ETV4P43268 484 aa18.02■□□□□ 0.47
GCDH-201ENST00000222214 NDST2P52849 883 aa18.02■□□□□ 0.47
GCDH-201ENST00000222214 ARPP19P56211 112 aa18.02■□□□□ 0.47
GCDH-201ENST00000222214 CDH17Q12864 832 aa18.02■□□□□ 0.47
GCDH-201ENST00000222214 RTP2Q5QGT7 225 aa18.02■□□□□ 0.47
GCDH-201ENST00000222214 RNF43Q68DV7 783 aa18.02■□□□□ 0.47
GCDH-201ENST00000222214 TMEM135Q86UB9 458 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms