RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 POMGNT2Q8NAT1 580 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 DEPDC7Q96QD5 511 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 FAM126AQ9BYI3 521 aaPredicted RBP19.28■□□□□ 0.68
SMPD3-201ENST00000219334 CATSPERZQ9NTU4 200 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 ZNF112Q9UJU3 913 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 POLR1DQ9Y2S0 133 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 HTR1BP28222 390 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 GRIK3Q13003 919 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 HJURPQ8NCD3 748 aaPredicted RBP19.28■□□□□ 0.68
SMPD3-201ENST00000219334 KCTD14Q9BQ13 255 aaPredicted RBP19.28■□□□□ 0.68
SMPD3-201ENST00000219334 ATP13A3Q9H7F0 1226 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 GPR1P46091 355 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 DNAAF5Q86Y56 855 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 SPPL2AQ8TCT8 520 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 ANKRD49Q8WVL7 239 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 PIK3R5Q8WYR1 880 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 RSPH1Q8WYR4 309 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 STARD8Q92502 1023 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 CDT1Q9H211 546 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 TBL1XO60907 577 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 JAK1P23458 1154 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 PARP6Q2NL67 630 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 KDM7AQ6ZMT4 941 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 REM2Q8IYK8 340 aaPredicted RBP19.28■□□□□ 0.68
SMPD3-201ENST00000219334 ZNF786Q8N393 782 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 HIPK3Q9H422 1215 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 COMMD8Q9NX08 183 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 PXDNQ92626 1479 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 ITSN1Q15811 1721 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 IL2P60568 153 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 ACSM2AQ08AH3 577 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 RRP1BQ14684 758 aaKnown RBP19.28■□□□□ 0.68
SMPD3-201ENST00000219334 ACSM2BQ68CK6 577 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 SCARA3Q6AZY7 606 aa19.28■□□□□ 0.68
SMPD3-201ENST00000219334 DNAJC1Q96KC8 554 aaKnown RBP19.28■□□□□ 0.68
SMPD3-201ENST00000219334 CCDC189A1A4V9 331 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 ZNF862O60290 1169 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 RAD23AP54725 363 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 TRAF2Q12933 501 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 RAET1GQ6H3X3 334 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 TRPC4APQ8TEL6 797 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 PHACTR1Q9C0D0 580 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 VTI1BQ9UEU0 232 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 PRKAG3Q9UGI9 489 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 SCAMP3O14828 347 aaKnown RBP19.27■□□□□ 0.68
SMPD3-201ENST00000219334 GLUD1P00367 558 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 SERPINE1P05121 402 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 EIF2S1P05198 315 aaKnown RBP19.27■□□□□ 0.68
SMPD3-201ENST00000219334 PYGMP11217 842 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 MYLPFQ96A32 169 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 TCF7L2Q9NQB0 619 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 ZMYM5Q9UJ78 669 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 A0A1B0GW55 424 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 IL1BP01584 269 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 DUX4L2P0CJ85 424 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 DUX4L3P0CJ86 424 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 DUX4L4P0CJ87 422 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 DUX4L5P0CJ88 424 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 DUX4L6P0CJ89 424 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 DUX4L7P0CJ90 424 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 SP100P23497 879 aaPredicted RBP19.27■□□□□ 0.68
SMPD3-201ENST00000219334 TLX1P31314 330 aaPredicted RBP19.27■□□□□ 0.68
SMPD3-201ENST00000219334 CRYMQ14894 314 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 CES3Q6UWW8 571 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 GPSM1Q86YR5 675 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 CERS5Q8N5B7 392 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 GAS2L1Q99501 681 aaPredicted RBP19.27■□□□□ 0.68
SMPD3-201ENST00000219334 ZYG11BQ9C0D3 744 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 ASB8Q9H765 288 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 DUX4Q9UBX2 424 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 PSME2Q9UL46 239 aa19.27■□□□□ 0.68
SMPD3-201ENST00000219334 CBWD6Q4V339 395 aa19.27■□□□□ 0.67
SMPD3-201ENST00000219334 ICE2Q659A1 982 aa19.27■□□□□ 0.67
SMPD3-201ENST00000219334 ELMO1Q92556 727 aa19.27■□□□□ 0.67
SMPD3-201ENST00000219334 CDHR5Q9HBB8 845 aa19.27■□□□□ 0.67
SMPD3-201ENST00000219334 LRRC4BQ9NT99 713 aa19.27■□□□□ 0.67
SMPD3-201ENST00000219334 TAGLN3Q9UI15 199 aa19.27■□□□□ 0.67
SMPD3-201ENST00000219334 C2CD2Q9Y426 696 aa19.27■□□□□ 0.67
SMPD3-201ENST00000219334 FCGR1AP12314 374 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 CXCR2P25025 360 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 UBE2E3Q969T4 207 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 MTMR9Q96QG7 549 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 SPATA31C2B4DYI2 1134 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 HS6ST1O60243 411 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 RBL1P28749 1068 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 HPCAL1P37235 193 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 SMAD3P84022 425 aaKnown RBP19.26■□□□□ 0.67
SMPD3-201ENST00000219334 NAB1Q13506 487 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 PIGZQ86VD9 579 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 ACO2Q99798 780 aaKnown RBP19.26■□□□□ 0.67
SMPD3-201ENST00000219334 TMEM120AQ9BXJ8 343 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 RHBGQ9H310 441 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 SLC27A5Q9Y2P5 690 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 LRRIQ1Q96JM4 1722 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 F8VP50 259 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 PFKPQ01813 784 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 SPIDRQ14159 915 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 TOMM20Q15388 145 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 CEP68Q76N32 757 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 CHPFQ8IZ52 775 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms