RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 B3GALT6Q96L58 329 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 MLPHQ9BV36 600 aaPredicted RBP30.39■■■□□ 2.46
PABPN1-201ENST00000216727 UGT1A7Q9HAW7 530 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 UGT1A10Q9HAW8 530 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 UGT1A8Q9HAW9 530 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 SLC17A7Q9P2U7 560 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 OGDHLQ9ULD0 1010 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 ARL2BPQ9Y2Y0 163 aa30.39■■■□□ 2.46
PABPN1-201ENST00000216727 MTMR11A4FU01 709 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 ARHGAP42A6NI28 874 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 H7C4K7 107 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 CACNG3O60359 315 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 PQBP1O60828 265 aaKnown RBP30.39■■■□□ 2.45
PABPN1-201ENST00000216727 FSBPO95073 299 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 JCHAINP01591 159 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 DHRS4L1P0CG22 281 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 NFKB1P19838 968 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 ETV4P43268 484 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 NIPAL4Q0D2K0 466 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 ZNF276Q8N554 614 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 OR52K1Q8NGK4 314 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 CDKL2Q92772 493 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 SPATA17Q96L03 361 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 DEFB118Q96PH6 123 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 ACTR5Q9H9F9 607 aaPredicted RBP30.39■■■□□ 2.45
PABPN1-201ENST00000216727 PIH1D1Q9NWS0 290 aaKnown RBP30.39■■■□□ 2.45
PABPN1-201ENST00000216727 MKS1Q9NXB0 559 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 FNIP2Q9P278 1114 aa30.39■■■□□ 2.45
PABPN1-201ENST00000216727 E9PAM4 449 aa30.38■■■□□ 2.45
PABPN1-201ENST00000216727 POLBP06746 335 aa30.38■■■□□ 2.45
PABPN1-201ENST00000216727 CPB1P15086 417 aa30.38■■■□□ 2.45
PABPN1-201ENST00000216727 CCNFP41002 786 aa30.38■■■□□ 2.45
PABPN1-201ENST00000216727 PSEN1P49768 467 aa30.38■■■□□ 2.45
PABPN1-201ENST00000216727 TUBP50607 506 aa30.38■■■□□ 2.45
PABPN1-201ENST00000216727 ATPAF2Q8N5M1 289 aa30.38■■■□□ 2.45
PABPN1-201ENST00000216727 COMMD8Q9NX08 183 aa30.38■■■□□ 2.45
PABPN1-201ENST00000216727 HCSTQ9UBK5 93 aa30.38■■■□□ 2.45
PABPN1-201ENST00000216727 WASH4PA8MWX3 477 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 RFPL1O75677 317 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 PARNO95453 639 aaKnown RBP30.37■■■□□ 2.45
PABPN1-201ENST00000216727 AFMIDQ63HM1 303 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 TRPM8Q7Z2W7 1104 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 C2orf15Q8WU43 125 aaKnown RBP30.37■■■□□ 2.45
PABPN1-201ENST00000216727 ZNF75CPQ92670 426 aaPredicted RBP30.37■■■□□ 2.45
PABPN1-201ENST00000216727 BFARQ9NZS9 450 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 PHTF1Q9UMS5 762 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 SHROOM3Q8TF72 1996 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 TBKBP1A7MCY6 615 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 DFFAO00273 331 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 SF3A3Q12874 501 aaKnown RBP eCLIP30.37■■■□□ 2.451e-7■■□□□ 13.8
PABPN1-201ENST00000216727 SPANXN3Q5MJ09 141 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 RTP2Q5QGT7 225 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 TIFABQ6ZNK6 161 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 FAM47EQ6ZV65 393 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 ANKS3Q6ZW76 656 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 LRRC49Q8IUZ0 686 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 RTL3Q8N8U3 475 aaKnown RBP30.37■■■□□ 2.45
PABPN1-201ENST00000216727 PPM1EQ8WY54 764 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 SPOCK2Q92563 424 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 LRRC40Q9H9A6 602 aa30.37■■■□□ 2.45
PABPN1-201ENST00000216727 HMX2A2RU54 273 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 COPEO14579 308 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 PSMD3O43242 534 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 EDF1O60869 148 aaKnown RBP30.36■■■□□ 2.45
PABPN1-201ENST00000216727 MOCS2O96007 188 aaPredicted RBP30.36■■■□□ 2.45
PABPN1-201ENST00000216727 LIG3P49916 1009 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 ARPP19P56211 112 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 TBX4P57082 545 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 FRG1Q14331 258 aaKnown RBP30.36■■■□□ 2.45
PABPN1-201ENST00000216727 PRPSAP1Q14558 356 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 RSPO2Q6UXX9 243 aaPredicted RBP30.36■■■□□ 2.45
PABPN1-201ENST00000216727 CHSY1Q86X52 802 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 CNTD1Q8N815 330 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 FBXO32Q969P5 355 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 OLA1Q9NTK5 396 aaKnown RBP30.36■■■□□ 2.45
PABPN1-201ENST00000216727 VANGL2Q9ULK5 521 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 TANC1Q9C0D5 1861 aa30.36■■■□□ 2.45
PABPN1-201ENST00000216727 AP3B1O00203 1094 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 MAFKO60675 156 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 CCNB1P14635 433 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 ACTN3Q08043 901 aaPredicted RBP30.35■■■□□ 2.45
PABPN1-201ENST00000216727 ANKRD33Q7Z3H0 272 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 LRRC43Q8N309 656 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 SCLYQ96I15 445 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 TTPALQ9BTX7 342 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 SLC39A8Q9C0K1 460 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 VNN2O95498 520 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 HAPLN1P10915 354 aaPredicted RBP30.35■■■□□ 2.45
PABPN1-201ENST00000216727 PIK3R6Q5UE93 754 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 ARHGAP36Q6ZRI8 547 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 C14orf80Q86SX3 495 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 UNC5BQ8IZJ1 945 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 IL12RB2Q99665 862 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 HIPK3Q9H422 1215 aa30.35■■■□□ 2.45
PABPN1-201ENST00000216727 TLR8Q9NR97 1041 aaKnown RBP30.35■■■□□ 2.45
PABPN1-201ENST00000216727 MTPAPQ9NVV4 582 aaKnown RBP eCLIP30.35■■■□□ 2.45
PABPN1-201ENST00000216727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP30.34■■■□□ 2.45
PABPN1-201ENST00000216727 MATN3O15232 486 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 NPY2RP49146 381 aa30.34■■■□□ 2.45
PABPN1-201ENST00000216727 OLIG2Q13516 323 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms