RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 LRRC34Q8IZ02 419 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 CACNA2D3Q8IZS8 1091 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 ANKLE1Q8NAG6 615 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 GDAP1Q8TB36 358 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 MZB1Q8WU39 189 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 CDKL2Q92772 493 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 UBE2OQ9C0C9 1292 aaKnown RBP17.81■□□□□ 0.44
VRK1-201ENST00000216639 MLXIPLQ9NP71 852 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 BFARQ9NZS9 450 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 PPARGC1AQ9UBK2 798 aaKnown RBP17.81■□□□□ 0.44
VRK1-201ENST00000216639 SLC12A8A0AV02 714 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 FAM159BA6NKW6 160 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 TYROBPO43914 113 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 PIAS1O75925 651 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 KRT38O76015 456 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 ZDHHC11BP0C7U3 371 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 CCNB1P14635 433 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 RHOQP17081 205 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 NFKB1P19838 968 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 OR1D2P34982 312 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 RASIP1Q5U651 963 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 PIK3R6Q5UE93 754 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 MIB1Q86YT6 1006 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 RNF168Q8IYW5 571 aaPredicted RBP17.81■□□□□ 0.44
VRK1-201ENST00000216639 PDZD8Q8NEN9 1154 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 GIPC2Q8TF65 315 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 TOP1MTQ969P6 601 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 TTC17Q96AE7 1141 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 MTBPQ96DY7 904 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 ZNF333Q96JL9 665 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 ZNF558Q96NG5 402 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 PAIP2Q9BPZ3 127 aaKnown RBP17.81■□□□□ 0.44
VRK1-201ENST00000216639 TTLL2Q9BWV7 592 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 ZYG11BQ9C0D3 744 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 SLC39A8Q9C0K1 460 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 LRRC40Q9H9A6 602 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 WBP1LQ9NX94 342 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 HSFX1Q9UBD0 423 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 MAGED2Q9UNF1 606 aaPredicted RBP17.81■□□□□ 0.44
VRK1-201ENST00000216639 AAR2Q9Y312 384 aaKnown RBP17.81■□□□□ 0.44
VRK1-201ENST00000216639 MATN3O15232 486 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 TM9SF1O15321 606 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 C1QAP02745 245 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 POLBP06746 335 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 SNRPAP09012 282 aaKnown RBP17.8■□□□□ 0.44
VRK1-201ENST00000216639 CD68P34810 354 aaPredicted RBP17.8■□□□□ 0.44
VRK1-201ENST00000216639 SERPINB9P50453 376 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 RING1Q06587 406 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 QPCTQ16769 361 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 ANO4Q32M45 955 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 MS4A13Q5J8X5 152 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 HHATQ5VTY9 493 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 AFMIDQ63HM1 303 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 NAPEPLDQ6IQ20 393 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 C14orf80Q86SX3 495 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 LINC00523Q86TU6 105 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 ANKS4BQ8N8V4 417 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 DNAAF3Q8N9W5 541 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 DENND1AQ8TEH3 1009 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 DIS3LQ8TF46 1054 aaKnown RBP17.8■□□□□ 0.44
VRK1-201ENST00000216639 OVCA2Q8WZ82 227 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 DPF3Q92784 378 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 TMEM169Q96HH4 297 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 SEC16BQ96JE7 1060 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 TGS1Q96RS0 853 aaKnown RBP17.8■□□□□ 0.44
VRK1-201ENST00000216639 PLAC1Q9HBJ0 212 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 AFF4Q9UHB7 1163 aaKnown RBP17.8■□□□□ 0.44
VRK1-201ENST00000216639 VANGL2Q9ULK5 521 aa17.8■□□□□ 0.44
VRK1-201ENST00000216639 TCP11X1B4DZS4 312 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 EFCAB14O75071 495 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 NEBLO76041 1014 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 ALDH1A2O94788 518 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 KIAA0754O94854 1291 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 ASMTLO95671 621 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 TBX18O95935 607 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 SOD2P04179 222 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 ATF6P18850 670 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 DNAJB2P25686 324 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 RPA3P35244 121 aaPredicted RBP17.79■□□□□ 0.44
VRK1-201ENST00000216639 NDST2P52849 883 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 NAB1Q13506 487 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 KCTD11Q693B1 232 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 ZNF276Q8N554 614 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 CABS1Q96KC9 395 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 C11orf49Q9H6J7 331 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 CASS4Q9NQ75 786 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 SYBUQ9NX95 663 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 MOCS1Q9NZB8 636 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 MPP6Q9NZW5 540 aa17.79■□□□□ 0.44
VRK1-201ENST00000216639 ATXN2Q99700 1313 aaKnown RBP17.79■□□□□ 0.44
VRK1-201ENST00000216639 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.78■□□□□ 0.44
VRK1-201ENST00000216639 GOLGA6L7A0A1B0GV03 622 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 TLR5O60602 858 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 MAFKO60675 156 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 ANXA9O76027 345 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 IGLV3-27P01718 113 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 CNTFP26441 200 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 NPY2RP49146 381 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 SPANXN3Q5MJ09 141 aa17.78■□□□□ 0.44
VRK1-201ENST00000216639 TPGS2Q68CL5 300 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms