RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 SNX15Q9NRS6 342 aa16.22■□□□□ 0.19
SNAPC1-201ENST00000216294 COPG2Q9UBF2 871 aa16.22■□□□□ 0.19
SNAPC1-201ENST00000216294 STX16-NPEPL1H3BU86 382 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 MDM4O15151 490 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 AVPR1AP37288 418 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 MAGEA6P43360 314 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 TBL3Q12788 808 aaKnown RBP16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 SEMA5AQ13591 1074 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 C11orf91Q3C1V1 193 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 GRAMD1BQ3KR37 738 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 HSP90AA5PQ58FG0 334 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 DCAF6Q58WW2 860 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 MORN1Q5T089 497 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 OLFML2BQ68BL8 750 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 TMEM110Q86TL2 294 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 RASAL3Q86YV0 1011 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 DEFB106AQ8N104 65 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 ZNF567Q8N184 647 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 SLC2A14Q8TDB8 520 aa16.21■□□□□ 0.19
SNAPC1-201ENST00000216294 CLGNO14967 610 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 SPTLC1O15269 473 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 BIRC5O15392 142 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 CFLARO15519 480 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 SNUPNO95149 360 aaKnown RBP16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 JUNP05412 331 aaKnown RBP16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 EPHA3P29320 983 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 PKNOX1P55347 436 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 ABCE1P61221 599 aaKnown RBP16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 TAF1CQ15572 869 aaPredicted RBP16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 ZRSR2Q15696 482 aaKnown RBP16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 DPYSL2Q16555 572 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 AP1ARQ63HQ0 302 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 PDSS2Q86YH6 399 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 RNF169Q8NCN4 708 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 FAM156AQ8NDB6 213 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 ZNF669Q96BR6 464 aaPredicted RBP16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 LENG8Q96PV6 779 aaPredicted RBP16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 PRDM12Q9H4Q4 367 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 ANLNQ9NQW6 1124 aa16.21■□□□□ 0.18
SNAPC1-201ENST00000216294 A0A0A0MRY4 1105 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 TPSB2P20231 275 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 TKTP29401 623 aaKnown RBP16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 MAP2K5Q13163 448 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 TPSAB1Q15661 275 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 CERCAMQ5T4B2 595 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 SYPL2Q5VXT5 272 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 HFE2Q6ZVN8 426 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 PID1Q7Z2X4 250 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 SATL1Q86VE3 508 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 SNX31Q8N9S9 440 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 SPATA13Q96N96 652 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 DDX43Q9NXZ2 648 aaKnown RBP16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 ZSWIM8A7E2V4 1837 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 SERPINE1P05121 402 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 SMIM10L2AP0DMW4 78 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 SMIM10L2BP0DMW5 78 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 TCN1P20061 433 aaPredicted RBP16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 MPSTP25325 297 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 ATICP31939 592 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 SULT1E1P49888 294 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 ZNF460Q14592 562 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 KYAT3Q6YP21 454 aaKnown RBP16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 STRA8Q7Z7C7 330 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 TLK2Q86UE8 772 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 ATP2A3Q93084 1043 aa16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 GNEQ9Y223 722 aaKnown RBP16.2■□□□□ 0.18
SNAPC1-201ENST00000216294 GLRA3O75311 464 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 CPA3P15088 417 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 CYP2B6P20813 491 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 TMCO4Q5TGY1 634 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 ARCQ7LC44 396 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 PPP4R1Q8TF05 950 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 LRRC39Q96DD0 335 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 NXF3Q9H4D5 531 aaKnown RBP16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 ASB7Q9H672 318 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 MKS1Q9NXB0 559 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 TXNDC16Q9P2K2 825 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 USP3Q9Y6I4 520 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 LAMA2P24043 3122 aaKnown RBP16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 TK2O00142 265 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 DPYSL4O14531 572 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 HSPA4LO95757 839 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 SERPINB9P50453 376 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 ROR2Q01974 943 aaKnown RBP16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 ADIGQ0VDE8 80 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 FSTL4Q6MZW2 842 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 MARK2Q7KZI7 788 aaKnown RBP16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 PTAR1Q7Z6K3 402 aaPredicted RBP16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 OSMRQ99650 979 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 ITGA11Q9UKX5 1188 aa16.19■□□□□ 0.18
SNAPC1-201ENST00000216294 I6L893 689 aaPredicted RBP16.18■□□□□ 0.18
SNAPC1-201ENST00000216294 PHGDHO43175 533 aaKnown RBP16.18■□□□□ 0.18
SNAPC1-201ENST00000216294 F2P00734 622 aa16.18■□□□□ 0.18
SNAPC1-201ENST00000216294 ZNF865P0CJ78 1059 aaPredicted RBP16.18■□□□□ 0.18
SNAPC1-201ENST00000216294 COX4I1P13073 169 aa16.18■□□□□ 0.18
SNAPC1-201ENST00000216294 NMD3Q96D46 503 aaKnown RBP16.18■□□□□ 0.18
SNAPC1-201ENST00000216294 GORASP1Q9BQQ3 440 aa16.18■□□□□ 0.18
SNAPC1-201ENST00000216294 ADAMTS10Q9H324 1103 aa16.18■□□□□ 0.18
SNAPC1-201ENST00000216294 CHRAC1Q9NRG0 131 aa16.18■□□□□ 0.18
SNAPC1-201ENST00000216294 CLIC5Q9NZA1 410 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms