RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ZNF569Q5MCW4 686 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 CXorf57Q6NSI4 855 aaKnown RBP20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 RNF25Q96BH1 459 aaPredicted RBP20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 HES6Q96HZ4 224 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 LTB4R2Q9NPC1 389 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 DNAI1Q9UI46 699 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 CLEC4EQ9ULY5 219 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 TRIOO75962 3097 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 DOCK4Q8N1I0 1966 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 USP27XA6NNY8 438 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 TIMM44O43615 452 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 CD48P09326 243 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 ZFXP17010 805 aaPredicted RBP20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 TNFRSF4P43489 277 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 MARCKSL1P49006 195 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 ANKRD20A8PQ5CZ79 823 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 DGKKQ5KSL6 1271 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 MEI1Q5TIA1 1274 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 WFDC5Q8TCV5 224 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 VPS28Q9UK41 221 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 PACSIN2Q9UNF0 486 aaPredicted RBP20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 JRKLQ9Y4A0 524 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 ATP5BP06576 529 aaKnown RBP20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 POLR2EP19388 210 aaKnown RBP20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 CD72P21854 359 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 CD70P32970 193 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 CSKP41240 450 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 YBEYP58557 167 aaPredicted RBP20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 SULT2A1Q06520 285 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 PARP15Q460N3 678 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 TFDP3Q5H9I0 405 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 FSCBQ5H9T9 825 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 RNF219Q5W0B1 726 aaPredicted RBP20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 PHTF2Q8N3S3 785 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 FAF2Q96CS3 445 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 C2orf49Q9BVC5 232 aaPredicted RBP20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 OSBPL6Q9BZF3 934 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 CIPCQ9C0C6 399 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 MAGEH1Q9H213 219 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 ZNF212Q9UDV6 495 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 ZKSCAN5Q9Y2L8 839 aa20.72■□□□□ 0.91
RHBDD3-201ENST00000216085 DNA2P51530 1060 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 NDST2P52849 883 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 GNA12Q03113 381 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 MMRN1Q13201 1228 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 TFDP2Q14188 446 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 POLD3Q15054 466 aaPredicted RBP20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 PLEKHG6Q3KR16 790 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 ARTNQ5T4W7 220 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 NAIF1Q69YI7 327 aaPredicted RBP20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 SPOCD1Q6ZMY3 1216 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 ZNF354CQ86Y25 554 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 RFX6Q8HWS3 928 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 UMODL1-AS1Q8N2C9 162 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 SYNPOQ8N3V7 929 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 FLCNQ8NFG4 579 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 RNF157Q96PX1 679 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 HPCAL4Q9UM19 191 aa20.71■□□□□ 0.91
RHBDD3-201ENST00000216085 A0A0A0MRY4 1105 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 TMEM221A6NGB7 291 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 M0R296 226 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 TRIM24O15164 1050 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 ASLP04424 464 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 AMPD1P23109 780 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 IL4RP24394 825 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 PEX5P50542 639 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 PLK1P53350 603 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 PPP2R5EQ16537 467 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 GEN1Q17RS7 908 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 PITRM1Q5JRX3 1037 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 ASTLQ6HA08 431 aaPredicted RBP20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 FSTL4Q6MZW2 842 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 KIAA0907Q7Z7F0 614 aaPredicted RBP20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 KCNV2Q8TDN2 545 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 FEM1AQ9BSK4 669 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 COL25A1Q9BXS0 654 aaPredicted RBP20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 ATP13A1Q9HD20 1204 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 MIA3Q5JRA6 1907 aa20.7■□□□□ 0.9
RHBDD3-201ENST00000216085 FAM170BA6NMN3 283 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 APOL1O14791 398 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 DCLK1O15075 740 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 TARSP26639 723 aaKnown RBP20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 CDKN2BP42772 138 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 SEL1L2Q5TEA6 688 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 MBLAC2Q68D91 279 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 IL31Q6EBC2 164 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 MFSD7Q6UXD7 560 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 TRMT11Q7Z4G4 463 aaKnown RBP20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 DCAF4L2Q8NA75 395 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 PJA1Q8NG27 643 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 PCDH19Q8TAB3 1148 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 ACDQ96AP0 544 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 FBRSL1Q9HCM7 1045 aaKnown RBP20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 ARHGAP42A6NI28 874 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 C3orf70A6NLC5 250 aaPredicted RBP20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 NPC1O15118 1278 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 EGFP01133 1207 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 GNG11P61952 73 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 CCINQ13939 588 aa20.69■□□□□ 0.9
RHBDD3-201ENST00000216085 FUT11Q495W5 492 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms