RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PDLIM7Q9NR12 457 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 HSFX1Q9UBD0 423 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 C2CD4BA6NLJ0 364 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 PRKCHP24723 683 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 DGKDQ16760 1214 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 SERPINI1Q99574 410 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 DHX33Q9H6R0 707 aaKnown RBP17.12■□□□□ 0.33
CTDP1-201ENST00000075430 FETUBQ9UGM5 382 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 PSMD13Q9UNM6 376 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 CSADQ9Y600 493 aa17.12■□□□□ 0.33
CTDP1-201ENST00000075430 NFASCO94856 1347 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 NUP205Q92621 2012 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 A0A0J9YVX5 310 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 AKAP10O43572 662 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 MSCO60682 206 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 STAG3L1P0CL83 205 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 SMIM18P0DKX4 95 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 CCDC130P13994 396 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 CYP3A5P20815 502 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 UBA1P22314 1058 aaKnown RBP17.11■□□□□ 0.33
CTDP1-201ENST00000075430 DCAF6Q58WW2 860 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 ZNF534Q76KX8 674 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 ANKRD23Q86SG2 305 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 DTNBP1Q96EV8 351 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 CXCL16Q9H2A7 254 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 R3HDMLQ9H3Y0 253 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 NOL11Q9H8H0 719 aaKnown RBP17.11■□□□□ 0.33
CTDP1-201ENST00000075430 SFMBT1Q9UHJ3 866 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 TLK1Q9UKI8 766 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 THSD7AQ9UPZ6 1657 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 KCNU1A8MYU2 1149 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 CCNT2O60583 730 aaKnown RBP17.11■□□□□ 0.33
CTDP1-201ENST00000075430 SLC5A2P31639 672 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 EPHX2P34913 555 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 ARL4AP40617 200 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 CASP2P42575 452 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 MAGEA10P43363 369 aaPredicted RBP17.11■□□□□ 0.33
CTDP1-201ENST00000075430 SERPINB9P50453 376 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 HPCAP84074 193 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 NIPA2Q8N8Q9 360 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 HTR3CQ8WXA8 447 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 SLC45A3Q96JT2 553 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 COQ10BQ9H8M1 238 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 DOCK5Q9H7D0 1870 aa17.11■□□□□ 0.33
CTDP1-201ENST00000075430 NFKBIEO00221 500 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 TRDMT1O14717 391 aaKnown RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 PPEF2O14830 753 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 TRMUO75648 421 aaKnown RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 CDK4P11802 303 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 PDAP1Q13442 181 aaKnown RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 USP10Q14694 798 aaKnown RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 ARL13AQ5H913 290 aaPredicted RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 CDKL3Q8IVW4 592 aaPredicted RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 FBXO16Q8IX29 292 aaPredicted RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 FAM110BQ8TC76 370 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 KCTD4Q8WVF5 259 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 KIF12Q96FN5 646 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 PRICKLE1Q96MT3 831 aaPredicted RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 PHF24Q9UPV7 400 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 LY75O60449 1722 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 FAM159BA6NKW6 160 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 TIPRLO75663 272 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 RNASEH2AO75792 299 aaKnown RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 C1QAP02745 245 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 C2P06681 752 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 TGM2P21980 687 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 NR4A1P22736 598 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 ARL2P36404 184 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 ATP1A4Q13733 1029 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 PTK2BQ14289 1009 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 RYBPQ8N488 228 aaPredicted RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 SPATA33Q96N06 139 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 HAPLN3Q96S86 360 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 ILKAPQ9H0C8 392 aaPredicted RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 RUVBL2Q9Y230 463 aaKnown RBP17.1■□□□□ 0.33
CTDP1-201ENST00000075430 PPME1Q9Y570 386 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 SMIM31A0A1B0GVY4 71 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 PDLIM1O00151 329 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 GSRP00390 522 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 GRIA4P48058 902 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 CLDN10P78369 228 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 MAP7D1Q3KQU3 841 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 BOLA3Q53S33 107 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 FAM160B1Q5W0V3 765 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 FSTL4Q6MZW2 842 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 EFCAB12Q6NXP0 572 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 UBR7Q8N806 425 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 TSPAN14Q8NG11 270 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 CHRAC1Q9NRG0 131 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 DCDC2Q9UHG0 476 aa17.1■□□□□ 0.33
CTDP1-201ENST00000075430 TRIP11Q15643 1979 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 ENTPD1P49961 510 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 ANKDD1AQ495B1 522 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 JADE3Q92613 823 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 KLHL32Q96NJ5 620 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 FCRL3Q96P31 734 aaPredicted RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 PAIP1Q9H074 479 aaKnown RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CDT1Q9H211 546 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 PRDM12Q9H4Q4 367 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms