RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Gpr142Q7TQN9 365 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 PreplQ8C167 725 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Agbl3Q8CDP0 1006 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Rpa1Q8VEE4 623 aaKnown RBP14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Olfr345Q8VGK4 311 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Abcg3Q99P81 650 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 CoprsQ9CQ13 173 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Trmt11Q9CWH5 460 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 TheglQ9DA15 459 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Znrf4Q9DAH2 327 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Rmdn1Q9DCV4 305 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Ccdc86Q9JJ89 426 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Scn5aQ9JJV9 2019 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Gm5538W4VSP6 401 aa14.67□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Vmn2r72D3Z4N8 856 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Abhd12bG3UZN6 359 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Fzd1O70421 642 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 YwhaqP68254 245 aaKnown RBP14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Pabpn1lQ5XFR0 273 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Phc1Q64028 1012 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 OcrlQ6NVF0 900 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Parp6Q6P6P7 630 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Cacna2d2Q6PHS9 1154 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Smg5Q6ZPY2 1017 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Olfr1198Q7TR12 308 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Got1l1Q7TSV6 404 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Chmp2bQ8BJF9 213 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Tmco6Q8BQX5 494 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Nup54Q8BTS4 510 aaKnown RBP14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Slc39a13Q8BZH0 361 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Ccdc28bQ8CEG5 200 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 4921504E06RikQ8CET2 560 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Acvr1cQ8K348 493 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Vps37bQ8R0J7 285 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 ClmpQ8R373 373 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Tbrg4Q91YM4 630 aaKnown RBP14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Atad3Q925I1 591 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 TrabdQ99JY4 376 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Lgals2Q9CQW5 130 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 QpctQ9CYK2 362 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Gpihbp1Q9D1N2 228 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Tmem81Q9D5K1 259 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 NckipsdQ9ESJ4 714 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Map3k6Q9WTR2 1291 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Mbd1Q9Z2E2 636 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Cib2Q9Z309 187 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Gm29554A0A087WNW4 188 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Fam124aD3Z5V4 536 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Ttc7bE9Q6P5 843 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Gm3424L7N298 263 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Gm8246M0QWX9 263 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Hes2O54792 157 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Hmga1P17095 107 aaKnown RBP14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Elk3P41971 409 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Pms2P54279 859 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Eif4ebp2P70445 120 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Uhmk1P97343 419 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Pdcd1Q02242 288 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Zbtb14Q08376 449 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 PrlrQ08501 608 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Mcm9Q2KHI9 1134 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Hsph1Q61699 858 aaKnown RBP14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Nlrp4fQ66X05 959 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Tas2r115Q7M719 310 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Cdkn3Q810P3 211 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 NfascQ810U3 1240 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Ostm1Q8BGT0 338 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Q8BHN7 327 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Eif2aQ8BJW6 581 aaKnown RBP14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Ccdc68Q8BVC4 333 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Znf276Q8CE64 614 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 DutQ8VCG1 200 aaKnown RBP14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Ccdc71Q8VEG0 433 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Akr1c14Q91WT7 323 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Pcdhb3Q91XZ7 784 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Pcdha1Q91Y21 948 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Cog2Q921L5 731 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Cpt1bQ924X2 772 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Gps1Q99LD4 471 aaKnown RBP14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Rin2Q9D684 903 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 SgshQ9EQ08 502 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 NagaQ9QWR8 415 aa14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Noc2lQ9WV70 747 aaKnown RBP14.66□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Ankfn1A0A140LIW7 1083 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Tnfrsf14A0A1W2P7D5 276 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Ebf2O08792 575 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Ercc2O08811 760 aaKnown RBP14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 TertO70372 1122 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Akr1b7P21300 316 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Arpp19P56212 112 aaKnown RBP14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Vps45P97390 570 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 B020004J07RikQ3UTC0 476 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Hbs1lQ69ZS7 682 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Orai3Q6P8G8 290 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Arhgap26Q6ZQ82 814 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 MroQ7TNB4 248 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Pdk1Q8BFP9 434 aaKnown RBP14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Frmd4aQ8BIE6 1020 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 BoraQ8BS90 525 aa14.65□□□□□ -0.06
Ssr1-204ENSMUST00000225319 Pak5Q8C015 719 aa14.65□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms