RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Marcksl1P28667 200 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 Epha3P29319 983 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 Cnr2P47936 347 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 Pitx1P70314 315 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 Lig3P97386 1015 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 AcrbpQ3V140 540 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 Phactr4Q501J7 694 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 Ccdc187Q8C5V8 958 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 Actl9Q8CG27 415 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 Adgrf1Q8VEC3 908 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 NfkbizQ9EST8 728 aa20.44■□□□□ 0.86
Lig3-204ENSMUST00000131537 Gm5926E9PWJ8 236 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Dpysl2O08553 572 aaKnown RBP20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Htr2cP34968 459 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Cep112Q5PR68 954 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Six1Q62231 284 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Naaladl1Q7M758 745 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Timm29Q8BGX2 266 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Q8BHR8 331 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Stx16Q8BVI5 326 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Uba6Q8C7R4 1053 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Slc30a5Q8R4H9 761 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Wnt9aQ8R5M2 365 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Ttc39cQ8VE09 580 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Olfr342Q8VGK7 312 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Gtf2ird2Q99NI3 936 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Atp11cQ9QZW0 1129 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 Slc22a3Q9WTW5 551 aa20.43■□□□□ 0.86
Lig3-204ENSMUST00000131537 AspgA0JNU3 564 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Zfp715G3X9T1 886 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Akap3O88987 864 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Vps45P97390 570 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Itga4Q00651 1039 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Naf1Q3UMQ8 489 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Luc7l3Q5SUF2 432 aaKnown RBP20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Syn2Q64332 586 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Rnf187Q8BFX1 236 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 RtknQ8C6B2 564 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Gsto2Q8K2Q2 248 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Vps18Q8R307 973 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Chrna6Q9R0W9 494 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 PapolbQ9WVP6 641 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Adamts20P59511 1906 aa20.42■□□□□ 0.86
Lig3-204ENSMUST00000131537 Bpifb9bA2AJD1 591 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Tubb1A2AQ07 451 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Gm3460E9QAI8 215 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Cyp4a14O35728 507 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Slc6a13P31649 602 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Nudt18Q3U2V3 323 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Prickle1Q3U5C7 832 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 SynaQ5G5D5 617 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Rap1gap2Q5SVL6 712 aaKnown RBP20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 HiraQ61666 1015 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 ThrspQ62264 150 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Amer3Q6NS69 780 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Fnip2Q80TD3 1108 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Pja2Q80U04 707 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Bpifb9aQ80XI7 591 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Frmd3Q8BHD4 595 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Vmn1r18Q8R2C8 299 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Cadm1Q8R5M8 456 aaKnown RBP20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Kcna10B2RQA1 511 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 G430095P16RikE9Q913 147 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Abhd12bG3UZN6 359 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 BC024978J3QPC3 361 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 PorP37040 678 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Hsph1Q61699 858 aaKnown RBP20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 RhocQ62159 193 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Q8BGC1 442 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Znf750Q8BH05 703 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Gle1Q8R322 699 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 TxlnbQ8VBT1 685 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Mark1Q8VHJ5 795 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 CrebzfQ91ZR3 358 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Gprc5bQ923Z0 410 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Rpl4Q9D8E6 419 aaKnown RBP20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Il18rapQ9Z2B1 614 aa20.41■□□□□ 0.86
Lig3-204ENSMUST00000131537 Aff1O88573 1216 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 ShdO88834 343 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Mapkapk2P49138 386 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Grhl3Q5FWH3 603 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Rnf215Q5SPX3 379 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Ddrgk1Q80WW9 315 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Tmem108Q8BHE4 574 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Vmn1r206Q8R277 312 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 TarsQ9D0R2 722 aaKnown RBP20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Fam114a1Q9D281 569 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Fundc1Q9DB70 155 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 MkksQ9JI70 570 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Plod1Q9R0E2 728 aa20.4■□□□□ 0.86
Lig3-204ENSMUST00000131537 Bclaf3A2AG58 752 aaKnown RBP20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Adamts6D3Z1A5 1117 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 EnamO55196 1274 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Dynlt1P51807 113 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 ZufspQ3T9Z9 577 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Hsf5Q5ND04 624 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Tubb2aQ7TMM9 445 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Zfp397Q7TNK4 527 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Frmd4aQ8BIE6 1020 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Zfp595Q8BIN6 625 aa20.39■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms