RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 UprtB1AVZ0 310 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Zscan5bB2RTN3 468 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Wnt3aP27467 352 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Hsd17b4P51660 735 aaKnown RBP8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Grid2ipQ0QWG9 1203 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Tespa1Q3U132 458 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Prickle1Q3U5C7 832 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Rnf180Q3U827 592 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ankrd34bQ3UUF8 508 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Proser1Q5PRE5 913 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ptpn14Q62130 1189 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 CochQ62507 552 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Prl3a1Q78Y73 227 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Trim32Q8CH72 655 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Tdrd7Q8K1H1 1086 aaKnown RBP8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Cyp2c50Q91X77 490 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Rtl9Q32KG4 1339 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Mtcl1Q3UHU5 1945 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Tada2bD3Z4Z0 420 aaKnown RBP8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Olfr414E9Q5P8 317 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Vav1P27870 845 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Cyp2c39P56656 490 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Garnl3Q3V0G7 1038 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Abcd2Q61285 741 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Tpd52Q62393 224 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Trim17Q7TPM3 477 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Olfr533Q7TRT7 320 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Pxylp1Q8BHA9 480 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Lca5lQ8C0X0 741 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ppp1r14cQ8R4S0 164 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Def8Q99J78 448 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Adi1Q99JT9 179 aa8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Wdr83Q9DAJ4 315 aaKnown RBP8.65□□□□□ -1.02
Sf3b1-201ENSMUST00000027127 Ttll9A2APC3 461 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Hmgxb3G3X9M3 1254 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Vmn2r19G5E8G4 854 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Calhm3J3QMI4 347 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Tbc1d10aP58802 500 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Ythdf1P59326 559 aaKnown RBP8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 XiapQ60989 496 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 HiraQ61666 1015 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Trim24Q64127 1051 aaKnown RBP8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Uts2bQ765I1 113 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Fnip2Q80TD3 1108 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Sel1l3Q80TS8 1137 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Slc7a4Q8BLQ7 635 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Ppp4r4Q8C0Y0 875 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Nkiras1Q8CEC5 192 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Lpin1Q91ZP3 924 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 LiasQ99M04 373 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Lrrc40Q9CRC8 602 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 XpotQ9CRT8 963 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Tlr6Q9EPW9 795 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Sept5Q9Z2Q6 369 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Adgra2Q91ZV8 1336 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Kiaa1522A2A7S8 1013 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Skint6A7XUZ6 1240 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Vmn2r11E9Q4X4 861 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Pou5f1P20263 352 aaKnown RBP8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Inpp1P49442 396 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Faf2Q3TDN2 445 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Aldh1a2Q62148 518 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Sarm1Q6PDS3 724 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Pan2Q8BGF7 1200 aaKnown RBP8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Ifi205aQ8CGE8 404 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Pnpla8Q8K1N1 776 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Ipo11Q8K2V6 975 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Snx15Q91WE1 337 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Zmat2Q9CPW7 199 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Gfra4Q9JJT2 260 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Dbn1Q9QXS6 706 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Ruvbl2Q9WTM5 463 aaKnown RBP8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Kif9Q9WV04 790 aa8.65□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Arhgef37A1IGU4 676 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Osbpl8B9EJ86 889 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Gm3138K7N754 218 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Sem1P60897 70 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Abce1P61222 599 aaKnown RBP8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Fam189a2Q4FZH1 290 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Rtl3Q6P1Y1 553 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 TdrkhQ80VL1 560 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Pcmtd2Q8BHD8 359 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Nme5Q99MH5 211 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Noxred1Q9D3S5 366 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Ppil6Q9D6D8 278 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Fip1l1Q9D824 581 aaKnown RBP8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Gm8369E9PZI3 166 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Tekt5G5E8A8 557 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 ChkaO54804 453 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 RpsaP14206 295 aaKnown RBP8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 BpgmP15327 259 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Slc10a3P21129 473 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Fmo3P97501 534 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Zbtb14Q08376 449 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 HdxQ14B70 692 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 HexdcQ3U4H6 486 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Mtnr1aQ61184 353 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Klhl17Q6TDP3 640 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Mbtps2Q8CHX6 515 aa8.64□□□□□ -1.03
Sf3b1-201ENSMUST00000027127 Ppp6r2Q8R3Q2 923 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms