RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 CenpaO35216 134 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Adra2bP30545 450 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Cyp2a12P56593 492 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Gpd1lQ3ULJ0 351 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 E330034G19RikQ3UWX6 351 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Arhgap30Q640N3 1101 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Ankrd13dQ6PD24 605 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Rpl10Q6ZWV3 214 aaKnown RBP17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Olfr670Q7TRP3 312 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Kctd15Q8K0E1 283 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 ClyblQ8R4N0 338 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Mgrn1Q9D074 532 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Psmd12Q9D8W5 456 aa17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 VapbQ9QY76 243 aaKnown RBP17.23■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Rap1gapA2ALS5 663 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Pim1P06803 397 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Foxk1P42128 719 aaKnown RBP17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Emilin3P59900 758 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Actr2P61161 394 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Kctd12Q6WVG3 327 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Acad10Q8K370 1069 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Ptbp2Q91Z31 531 aaKnown RBP17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Rnf112Q96DY5 654 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Tnpo2Q99LG2 887 aaKnown RBP17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Lpin3Q99PI4 848 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 4930469K13RikA0A286YDB2 92 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Kcnt2D3Z649 1135 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Psmc3O88685 442 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 P01670 111 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 P01671 111 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 P01672 111 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Kcna2P63141 499 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Msx3P70354 204 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Zscan2Q07230 614 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Lsg1Q3UM18 644 aaKnown RBP17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Ifit3Q64345 403 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Prrt3Q6PE13 971 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Znf12Q7TSI0 686 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Taco1Q8K0Z7 294 aaKnown RBP17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Acot11Q8VHQ9 594 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 MvdQ99JF5 401 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Dhrs4Q99LB2 279 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Iqcj-Schip1A0A088MLT8 559 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 SmoktcrA2KF29 484 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Schip1P0DPB4 484 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Cep295nlQ497N6 533 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Elac2Q80Y81 831 aaKnown RBP17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Slc35c2Q8VCX2 364 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Ing2Q9ESK4 281 aa17.22■□□□□ 0.35
Ctcf-201ENSMUST00000005841 CblP22682 913 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 S100bP50114 92 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Psmb4P99026 264 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Pdap1Q3UHX2 181 aaKnown RBP17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 ADGRF3Q58Y75 991 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Abcd2Q61285 741 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Plppr4Q7TME0 766 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 EmsyQ8BMB0 1264 aaKnown RBP17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Prdm11A2AGX3 565 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Cyp2b13A6H6J2 491 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Tmem233D3Z1U7 110 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Pde4aO89084 844 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 AldoaP05064 364 aaKnown RBP17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Myf6P15375 242 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Csf3rP40223 837 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Prox1P48437 737 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 SftpdP50404 374 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Dpf3P58269 378 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 OxtrP97926 388 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Pitpnm3Q3UHE1 974 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Eno4Q8C042 619 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Ak5Q920P5 562 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Lactb2Q99KR3 288 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Dcp2Q9CYC6 422 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Cmtm6Q9CZ69 183 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Pgam1Q9DBJ1 254 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Tmem8aQ9ESN3 769 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Copg1Q9QZE5 874 aa17.21■□□□□ 0.35
Ctcf-201ENSMUST00000005841 Gm16427J3QN52 483 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Cyp27b1O35084 507 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Clk2O35491 499 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Socs2O35717 198 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Pknox1O70477 436 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Patl1Q3TC46 770 aaKnown RBP17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Tmed1Q3V009 227 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Mfhas1Q3V1N1 1048 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Atg9bQ6EBV9 922 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Sfrp1Q8C4U3 314 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Fnbp1lQ8K012 605 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Golm1Q91XA2 393 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Slc35b2Q91ZN5 431 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Armc1Q9D7A8 282 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Clca1Q9D7Z6 913 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 AadatQ9WVM8 425 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Ankrd34aB2RW11 495 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Kcnk4O88454 398 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Jmjd8Q3TA59 316 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 CamkvQ3UHL1 512 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Gm1587Q3UT80 123 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Klhl38Q8BSF5 581 aa17.2■□□□□ 0.34
Ctcf-201ENSMUST00000005841 Anapc2Q8BZQ7 837 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms