RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Trim8Q99PJ2 551 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Dnajb7Q9QYI8 312 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Tmem115Q9WUH1 350 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Ttll11A4Q9F4 727 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Gm28043E0CXC2 719 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Fbxl18E9PYR1 771 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 NoctO35710 429 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 UmpsP13439 481 aaKnown RBP16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Muc1Q02496 630 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Slc16a10Q3U9N9 512 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Gpd1lQ3ULJ0 351 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Slc5a10Q5SWY8 596 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 PostnQ62009 838 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Exoc3l4Q6DIA2 721 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Aste1Q8BIR2 672 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Tmprss4Q8VCA5 435 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Mul1Q8VCM5 352 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 ProzQ9CQW3 399 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Prorsd1Q9D820 169 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Rmdn1Q9DCV4 305 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Nrip2Q9JHR9 270 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Neu2Q9JMH3 379 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Rbck1Q9WUB0 508 aa16.78■□□□□ 0.28
Shh-201ENSMUST00000002708 Sf3b1Q99NB9 1304 aaKnown RBP16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 2310061I04RikB8JJ69 315 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Daw1D3Z7A5 415 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Galntl6E5D8G1 601 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Pknox1O70477 436 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Abce1P61222 599 aaKnown RBP16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Ubxn2bQ0KL01 331 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 CochQ62507 552 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Zdhhc19Q810M5 347 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Tmem198Q8BG75 360 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Arhgef33Q8BW86 850 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Fndc8Q9D2H8 321 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Akr1c12Q9JLI0 323 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Tnni1Q9WUZ5 187 aa16.77■□□□□ 0.28
Shh-201ENSMUST00000002708 Armt1A6H630 439 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Vmn2r19G5E8G4 854 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Gm3264L7N2C5 238 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 LdlrP35951 862 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Kcnj6P48542 425 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Emilin3P59900 758 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Agap2Q3UHD9 1186 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Pcnx4Q3UVY5 1174 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Zbtb8osQ505B7 168 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 LppQ8BFW7 613 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Cgrrf1Q8BMJ7 332 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Lrrc56Q8K375 552 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Dedd2Q8QZV0 330 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Glra3Q91XP5 464 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Stk33Q924X7 491 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Ggt7Q99JP7 662 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 StambpQ9CQ26 424 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 1700080O16RikQ9D9G4 284 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Nme7Q9QXL8 395 aa16.77■□□□□ 0.27
Shh-201ENSMUST00000002708 Vmn2r121A2BE32 847 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Rad51ap2G3UW63 976 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 TnfP06804 235 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Ckmt1P30275 418 aaKnown RBP16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Plk2P53351 682 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Atp9bP98195 1146 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Proser1Q5PRE5 913 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Fbxw2Q60584 422 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Kirrel2Q7TSU7 700 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Zbtb41Q811F1 908 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Ccdc184Q8BMK5 191 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Klhl38Q8BSF5 581 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Twf1Q91YR1 350 aaKnown RBP16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Q922R1 422 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Homer3Q99JP6 356 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Chmp2aQ9DB34 222 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Abcb9Q9JJ59 762 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Egfl7Q9QXT5 275 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Slc23a1Q9Z2J0 605 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 LtfP08071 707 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Wnt3aP27467 352 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Mxd1P50538 227 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Fdft1P53798 416 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Mpp1P70290 466 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Fbp2P70695 339 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Meaf6Q2VPQ9 191 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Tmem26Q3UP23 366 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Q5XFZ0 217 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Slc39a14Q75N73 489 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Il17reQ8BH06 637 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Klhl2Q8JZP3 593 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Ophn1Q99J31 802 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Fam136aQ9CR98 138 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Micu3Q9CTY5 523 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 CygbQ9CX80 190 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Efhc1Q9D9T8 648 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Strn3Q9ERG2 796 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 Map3k14Q9WUL6 942 aa16.76■□□□□ 0.27
Shh-201ENSMUST00000002708 DgkdE9PUQ8 1220 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Ccdc144bE9PVZ3 520 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 EsrraO08580 422 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 MttpO08601 894 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Slc1a6O35544 561 aa16.75■□□□□ 0.27
Shh-201ENSMUST00000002708 Alas2P08680 587 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms