RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 POGKQ9P215 609 aa17.61■□□□□ 0.41
PHGDH-233ENST00000642021 ADGRB2O60241 1585 aa17.6■□□□□ 0.41
PHGDH-233ENST00000642021 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
PHGDH-233ENST00000642021 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-233ENST00000642021 CAMSAP1Q5T5Y3 1602 aa17.59■□□□□ 0.41
PHGDH-233ENST00000642021 NOB1Q9ULX3 412 aaKnown RBP17.58■□□□□ 0.41
PHGDH-233ENST00000642021 ZMYM3Q14202 1370 aa17.58■□□□□ 0.41
PHGDH-233ENST00000642021 CT47B1P0C2W7 299 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-233ENST00000642021 ITPRIPQ8IWB1 547 aa17.57■□□□□ 0.4
PHGDH-233ENST00000642021 RIPK4P57078 832 aa17.57■□□□□ 0.4
PHGDH-233ENST00000642021 ATF7IPQ6VMQ6 1270 aa17.57■□□□□ 0.4
PHGDH-233ENST00000642021 PRAM1Q96QH2 718 aa17.57■□□□□ 0.4
PHGDH-233ENST00000642021 PIK3C2BO00750 1634 aa17.57■□□□□ 0.4
PHGDH-233ENST00000642021 COL3A1P02461 1466 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-233ENST00000642021 SPRYD3Q8NCJ5 442 aa17.56■□□□□ 0.4
PHGDH-233ENST00000642021 FBLN1P23142 703 aa17.56■□□□□ 0.4
PHGDH-233ENST00000642021 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
PHGDH-233ENST00000642021 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-233ENST00000642021 HDAC1Q13547 482 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-233ENST00000642021 CD163L1Q9NR16 1453 aa17.54■□□□□ 0.4
PHGDH-233ENST00000642021 DDX19BQ9UMR2 479 aa17.54■□□□□ 0.4
PHGDH-233ENST00000642021 MFAP1P55081 439 aaKnown RBP17.53■□□□□ 0.4
PHGDH-233ENST00000642021 SLC52A1Q9NWF4 448 aa17.53■□□□□ 0.4
PHGDH-233ENST00000642021 TERF2IPQ9NYB0 399 aa17.53■□□□□ 0.4
PHGDH-233ENST00000642021 DIAPH1O60610 1272 aaKnown RBP17.52■□□□□ 0.4
PHGDH-233ENST00000642021 ZBTB40Q9NUA8 1239 aa17.52■□□□□ 0.4
PHGDH-233ENST00000642021 SMC5Q8IY18 1101 aa17.52■□□□□ 0.4
PHGDH-233ENST00000642021 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.4
PHGDH-233ENST00000642021 PTPRMP28827 1452 aa17.52■□□□□ 0.4
PHGDH-233ENST00000642021 ZFYVE9O95405 1425 aa17.52■□□□□ 0.39
PHGDH-233ENST00000642021 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
PHGDH-233ENST00000642021 IL16Q14005 1332 aa17.51■□□□□ 0.39
PHGDH-233ENST00000642021 ARHGAP31Q2M1Z3 1444 aa17.51■□□□□ 0.39
PHGDH-233ENST00000642021 CFAP74Q9C0B2 1584 aa17.5■□□□□ 0.39
PHGDH-233ENST00000642021 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
PHGDH-233ENST00000642021 FBXO31Q5XUX0 539 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-233ENST00000642021 CDK19Q9BWU1 502 aa17.5■□□□□ 0.39
PHGDH-233ENST00000642021 PNPLA6Q8IY17 1366 aa17.5■□□□□ 0.39
PHGDH-233ENST00000642021 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
PHGDH-233ENST00000642021 YTHDC2Q9H6S0 1430 aaKnown RBP17.48■□□□□ 0.39
PHGDH-233ENST00000642021 YEATS2Q9ULM3 1422 aa17.48■□□□□ 0.39
PHGDH-233ENST00000642021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
PHGDH-233ENST00000642021 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
PHGDH-233ENST00000642021 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-233ENST00000642021 PRKAR2BP31323 418 aa17.46■□□□□ 0.39
PHGDH-233ENST00000642021 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
PHGDH-233ENST00000642021 THUMPD2Q9BTF0 503 aaKnown RBP17.46■□□□□ 0.39
PHGDH-233ENST00000642021 MED14O60244 1454 aa17.46■□□□□ 0.39
PHGDH-233ENST00000642021 FCHSD2O94868 740 aa17.45■□□□□ 0.38
PHGDH-233ENST00000642021 LNPKQ9C0E8 428 aa17.45■□□□□ 0.38
PHGDH-233ENST00000642021 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
PHGDH-233ENST00000642021 NEO1Q92859 1461 aa17.45■□□□□ 0.38
PHGDH-233ENST00000642021 RSPH6AQ9H0K4 717 aa17.45■□□□□ 0.38
PHGDH-233ENST00000642021 KIF16BQ96L93 1317 aa17.45■□□□□ 0.38
PHGDH-233ENST00000642021 MYO5BQ9ULV0 1848 aa17.45■□□□□ 0.38
PHGDH-233ENST00000642021 IPO8O15397 1037 aaKnown RBP17.45■□□□□ 0.38
PHGDH-233ENST00000642021 NUCB1Q02818 461 aa17.45■□□□□ 0.38
PHGDH-233ENST00000642021 WAPLQ7Z5K2 1190 aa17.44■□□□□ 0.38
PHGDH-233ENST00000642021 HMOX1P09601 288 aa17.44■□□□□ 0.38
PHGDH-233ENST00000642021 ALDH1L2Q3SY69 923 aa17.43■□□□□ 0.38
PHGDH-233ENST00000642021 TMEM131LA2VDJ0 1609 aa17.43■□□□□ 0.38
PHGDH-233ENST00000642021 ARHGEF40Q8TER5 1519 aa17.43■□□□□ 0.38
PHGDH-233ENST00000642021 MCM4P33991 863 aa17.43■□□□□ 0.38
PHGDH-233ENST00000642021 TSPYL6Q8N831 410 aa17.43■□□□□ 0.38
PHGDH-233ENST00000642021 PNNQ9H307 717 aaKnown RBP17.42■□□□□ 0.38
PHGDH-233ENST00000642021 CHD1LQ86WJ1 897 aa17.41■□□□□ 0.38
PHGDH-233ENST00000642021 ELL2O00472 640 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-233ENST00000642021 ZBTB7BO15156 539 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-233ENST00000642021 VAMP4O75379 141 aa17.41■□□□□ 0.38
PHGDH-233ENST00000642021 C1orf115Q9H7X2 142 aa17.41■□□□□ 0.38
PHGDH-233ENST00000642021 LRRC7Q96NW7 1537 aa17.4■□□□□ 0.38
PHGDH-233ENST00000642021 ARXQ96QS3 562 aa17.4■□□□□ 0.38
PHGDH-233ENST00000642021 CHMP5Q9NZZ3 219 aa17.4■□□□□ 0.38
PHGDH-233ENST00000642021 ZNF692Q9BU19 519 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-233ENST00000642021 GZF1Q9H116 711 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-233ENST00000642021 EMILIN1Q9Y6C2 1016 aa17.4■□□□□ 0.38
PHGDH-233ENST00000642021 FAM135BQ49AJ0 1406 aa17.39■□□□□ 0.37
PHGDH-233ENST00000642021 ANKRD26Q9UPS8 1709 aa17.39■□□□□ 0.37
PHGDH-233ENST00000642021 ALKQ9UM73 1620 aa17.39■□□□□ 0.37
PHGDH-233ENST00000642021 MRPL50Q8N5N7 158 aaKnown RBP17.39■□□□□ 0.37
PHGDH-233ENST00000642021 CLTCQ00610 1675 aaKnown RBP17.38■□□□□ 0.37
PHGDH-233ENST00000642021 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-233ENST00000642021 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
PHGDH-233ENST00000642021 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
PHGDH-233ENST00000642021 STAG3Q9UJ98 1225 aa17.38■□□□□ 0.37
PHGDH-233ENST00000642021 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
PHGDH-233ENST00000642021 RBM25P49756 843 aaKnown RBP17.38■□□□□ 0.37
PHGDH-233ENST00000642021 ANKRD45Q5TZF3 282 aa17.37■□□□□ 0.37
PHGDH-233ENST00000642021 PREX1Q8TCU6 1659 aa17.37■□□□□ 0.37
PHGDH-233ENST00000642021 SIRT2Q8IXJ6 389 aa17.37■□□□□ 0.37
PHGDH-233ENST00000642021 FAM43AQ8N2R8 423 aa17.37■□□□□ 0.37
PHGDH-233ENST00000642021 HSCBQ8IWL3 235 aa17.36■□□□□ 0.37
PHGDH-233ENST00000642021 XRCC6P12956 609 aaKnown RBP eCLIP17.36■□□□□ 0.375e-6■■□□□ 11.5
PHGDH-233ENST00000642021 RICTORQ6R327 1708 aa17.36■□□□□ 0.37
PHGDH-233ENST00000642021 IL13P35225 146 aa17.35■□□□□ 0.37
PHGDH-233ENST00000642021 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
PHGDH-233ENST00000642021 NME9Q86XW9 330 aa17.35■□□□□ 0.37
PHGDH-233ENST00000642021 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
PHGDH-233ENST00000642021 TRAK2O60296 914 aa17.34■□□□□ 0.37
PHGDH-233ENST00000642021 DDIT3P35638 169 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms