RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 USP6P35125 1406 aa14.05□□□□□ -0.16
PHGDH-224ENST00000641711 FOXO3O43524 673 aa14.04□□□□□ -0.16
PHGDH-224ENST00000641711 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
PHGDH-224ENST00000641711 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-224ENST00000641711 ACEP12821 1306 aa14.03□□□□□ -0.16
PHGDH-224ENST00000641711 USP54Q70EL1 1684 aa14.03□□□□□ -0.16
PHGDH-224ENST00000641711 PNPLA6Q8IY17 1366 aa14.02□□□□□ -0.17
PHGDH-224ENST00000641711 ANKRD36BQ8N2N9 1353 aa14.02□□□□□ -0.17
PHGDH-224ENST00000641711 SPATA31A6Q5VVP1 1343 aa14.02□□□□□ -0.17
PHGDH-224ENST00000641711 SPATA31A3Q5VYP0 1347 aa14.02□□□□□ -0.17
PHGDH-224ENST00000641711 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.17
PHGDH-224ENST00000641711 TERF2IPQ9NYB0 399 aa14.02□□□□□ -0.17
PHGDH-224ENST00000641711 CD163L1Q9NR16 1453 aa14.01□□□□□ -0.17
PHGDH-224ENST00000641711 EDC4Q6P2E9 1401 aaKnown RBP14.01□□□□□ -0.17
PHGDH-224ENST00000641711 SSH2Q76I76 1423 aa14.01□□□□□ -0.17
PHGDH-224ENST00000641711 KRT28Q7Z3Y7 464 aa14.01□□□□□ -0.17
PHGDH-224ENST00000641711 HDGFL2Q7Z4V5 671 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-224ENST00000641711 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-224ENST00000641711 PRKRIP1Q9H875 184 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-224ENST00000641711 CABP1Q9NZU7 370 aa14.01□□□□□ -0.17
PHGDH-224ENST00000641711 ABCA3Q99758 1704 aa14.01□□□□□ -0.17
PHGDH-224ENST00000641711 TTC21AQ8NDW8 1320 aa14□□□□□ -0.17
PHGDH-224ENST00000641711 CRYBG1Q9Y4K1 1723 aa13.99□□□□□ -0.17
PHGDH-224ENST00000641711 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
PHGDH-224ENST00000641711 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
PHGDH-224ENST00000641711 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
PHGDH-224ENST00000641711 TMC1Q8TDI8 760 aa13.97□□□□□ -0.17
PHGDH-224ENST00000641711 DDX17Q92841 729 aaKnown RBP13.97□□□□□ -0.17
PHGDH-224ENST00000641711 PIK3C2AO00443 1686 aa13.97□□□□□ -0.17
PHGDH-224ENST00000641711 KIF20BQ96Q89 1820 aa13.96□□□□□ -0.17
PHGDH-224ENST00000641711 PHRF1Q9P1Y6 1649 aaKnown RBP13.96□□□□□ -0.17
PHGDH-224ENST00000641711 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
PHGDH-224ENST00000641711 XPCQ01831 940 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-224ENST00000641711 SLIT3O75094 1523 aa13.94□□□□□ -0.18
PHGDH-224ENST00000641711 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
PHGDH-224ENST00000641711 USP19O94966 1318 aa13.93□□□□□ -0.18
PHGDH-224ENST00000641711 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
PHGDH-224ENST00000641711 ANKRD26Q9UPS8 1709 aa13.93□□□□□ -0.18
PHGDH-224ENST00000641711 NLRP13Q86W25 1043 aa13.92□□□□□ -0.18
PHGDH-224ENST00000641711 ABCC6O95255 1503 aa13.91□□□□□ -0.18
PHGDH-224ENST00000641711 LRP6O75581 1613 aa13.91□□□□□ -0.18
PHGDH-224ENST00000641711 PAK3O75914 559 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-224ENST00000641711 NSD2O96028 1365 aa13.91□□□□□ -0.18
PHGDH-224ENST00000641711 OVOS2A0A0J9YW53 1432 aa13.9□□□□□ -0.18
PHGDH-224ENST00000641711 OVOS2Q6IE36 1432 aa13.9□□□□□ -0.18
PHGDH-224ENST00000641711 ABTB2Q8N961 1025 aa13.9□□□□□ -0.18
PHGDH-224ENST00000641711 NWD2Q9ULI1 1742 aa13.9□□□□□ -0.18
PHGDH-224ENST00000641711 NSD3Q9BZ95 1437 aa13.9□□□□□ -0.19
PHGDH-224ENST00000641711 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.89□□□□□ -0.19
PHGDH-224ENST00000641711 COL14A1Q05707 1796 aaKnown RBP13.88□□□□□ -0.19
PHGDH-224ENST00000641711 CPDO75976 1380 aa13.88□□□□□ -0.19
PHGDH-224ENST00000641711 LMOD2Q6P5Q4 547 aa13.88□□□□□ -0.19
PHGDH-224ENST00000641711 CGNL1Q0VF96 1302 aa13.88□□□□□ -0.19
PHGDH-224ENST00000641711 NFAT5O94916 1531 aa13.87□□□□□ -0.19
PHGDH-224ENST00000641711 NLRP6P59044 892 aa13.87□□□□□ -0.19
PHGDH-224ENST00000641711 CCDC184Q52MB2 194 aa13.87□□□□□ -0.19
PHGDH-224ENST00000641711 KCNH5Q8NCM2 988 aa13.87□□□□□ -0.19
PHGDH-224ENST00000641711 POLR3GLQ9BT43 218 aa13.87□□□□□ -0.19
PHGDH-224ENST00000641711 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
PHGDH-224ENST00000641711 NPC1L1Q9UHC9 1359 aa13.86□□□□□ -0.19
PHGDH-224ENST00000641711 PLCH1Q4KWH8 1693 aa13.86□□□□□ -0.19
PHGDH-224ENST00000641711 RALBP1Q15311 655 aa13.86□□□□□ -0.19
PHGDH-224ENST00000641711 HAP1P54257 671 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-224ENST00000641711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.19
PHGDH-224ENST00000641711 CARD14Q9BXL6 1004 aa13.84□□□□□ -0.19
PHGDH-224ENST00000641711 PANK3Q9H999 370 aa13.84□□□□□ -0.19
PHGDH-224ENST00000641711 LMO7Q8WWI1 1683 aa13.84□□□□□ -0.19
PHGDH-224ENST00000641711 LTN1O94822 1766 aa13.83□□□□□ -0.19
PHGDH-224ENST00000641711 PER1O15534 1290 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-224ENST00000641711 HNRNPUQ00839 825 aaKnown RBP eCLIP13.83□□□□□ -0.2
PHGDH-224ENST00000641711 MEX3CQ5U5Q3 659 aaKnown RBP13.83□□□□□ -0.2
PHGDH-224ENST00000641711 NME9Q86XW9 330 aa13.83□□□□□ -0.2
PHGDH-224ENST00000641711 COG3Q96JB2 828 aa13.83□□□□□ -0.2
PHGDH-224ENST00000641711 KNSTRNQ9Y448 316 aa13.83□□□□□ -0.2
PHGDH-224ENST00000641711 SLIT2O94813 1529 aa13.83□□□□□ -0.2
PHGDH-224ENST00000641711 NRAPQ86VF7 1730 aa13.82□□□□□ -0.2
PHGDH-224ENST00000641711 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-224ENST00000641711 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-224ENST00000641711 FYB1O15117 783 aa13.82□□□□□ -0.2
PHGDH-224ENST00000641711 GCP02774 474 aa13.82□□□□□ -0.2
PHGDH-224ENST00000641711 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-224ENST00000641711 KIF24Q5T7B8 1368 aa13.82□□□□□ -0.2
PHGDH-224ENST00000641711 SUPT16HQ9Y5B9 1047 aaKnown RBP13.81□□□□□ -0.2
PHGDH-224ENST00000641711 RTL1A6NKG5 1358 aa13.81□□□□□ -0.2
PHGDH-224ENST00000641711 PARD3Q8TEW0 1356 aa13.81□□□□□ -0.2
PHGDH-224ENST00000641711 COL18A1P39060 1754 aa13.81□□□□□ -0.2
PHGDH-224ENST00000641711 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
PHGDH-224ENST00000641711 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-224ENST00000641711 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
PHGDH-224ENST00000641711 ZBED9Q6R2W3 1325 aa13.8□□□□□ -0.2
PHGDH-224ENST00000641711 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
PHGDH-224ENST00000641711 AATKQ6ZMQ8 1374 aa13.8□□□□□ -0.2
PHGDH-224ENST00000641711 KIAA0232Q92628 1395 aa13.8□□□□□ -0.2
PHGDH-224ENST00000641711 NUTM2GQ5VZR2 741 aa13.79□□□□□ -0.2
PHGDH-224ENST00000641711 ZNF772Q68DY9 489 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-224ENST00000641711 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
PHGDH-224ENST00000641711 ADAMTS2O95450 1211 aa13.78□□□□□ -0.2
PHGDH-224ENST00000641711 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-224ENST00000641711 BLMP54132 1417 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-224ENST00000641711 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms