RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 KNSTRNQ9Y448 316 aa17.86■□□□□ 0.45
PHGDH-221ENST00000641573 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
PHGDH-221ENST00000641573 BLMP54132 1417 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-221ENST00000641573 SF3B2Q13435 895 aaKnown RBP17.85■□□□□ 0.45
PHGDH-221ENST00000641573 COL22A1Q8NFW1 1626 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-221ENST00000641573 SLC12A5Q9H2X9 1139 aa17.85■□□□□ 0.45
PHGDH-221ENST00000641573 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-221ENST00000641573 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
PHGDH-221ENST00000641573 PARD3Q8TEW0 1356 aa17.82■□□□□ 0.44
PHGDH-221ENST00000641573 CC2D1BQ5T0F9 858 aaKnown RBP17.82■□□□□ 0.44
PHGDH-221ENST00000641573 NINLQ9Y2I6 1382 aa17.81■□□□□ 0.44
PHGDH-221ENST00000641573 NPHP3Q7Z494 1330 aa17.81■□□□□ 0.44
PHGDH-221ENST00000641573 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-221ENST00000641573 CCDC184Q52MB2 194 aa17.81■□□□□ 0.44
PHGDH-221ENST00000641573 CARD14Q9BXL6 1004 aa17.81■□□□□ 0.44
PHGDH-221ENST00000641573 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-221ENST00000641573 LRP5O75197 1615 aa17.8■□□□□ 0.44
PHGDH-221ENST00000641573 MYBBP1AQ9BQG0 1328 aaKnown RBP17.79■□□□□ 0.44
PHGDH-221ENST00000641573 MRS2Q9HD23 443 aa17.79■□□□□ 0.44
PHGDH-221ENST00000641573 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
PHGDH-221ENST00000641573 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
PHGDH-221ENST00000641573 DEFB132Q7Z7B7 95 aa17.78■□□□□ 0.44
PHGDH-221ENST00000641573 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
PHGDH-221ENST00000641573 ESCO1Q5FWF5 840 aa17.77■□□□□ 0.44
PHGDH-221ENST00000641573 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
PHGDH-221ENST00000641573 ADGRB2O60241 1585 aa17.77■□□□□ 0.44
PHGDH-221ENST00000641573 CDC42BPGQ6DT37 1551 aa17.77■□□□□ 0.44
PHGDH-221ENST00000641573 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.75■□□□□ 0.43
PHGDH-221ENST00000641573 UNC5CLQ8IV45 518 aa17.75■□□□□ 0.43
PHGDH-221ENST00000641573 CENPBP07199 599 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-221ENST00000641573 TERF2IPQ9NYB0 399 aa17.74■□□□□ 0.43
PHGDH-221ENST00000641573 CABP1Q9NZU7 370 aa17.74■□□□□ 0.43
PHGDH-221ENST00000641573 XPCQ01831 940 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-221ENST00000641573 NLRP13Q86W25 1043 aa17.73■□□□□ 0.43
PHGDH-221ENST00000641573 NUDT16Q96DE0 195 aaKnown RBP17.73■□□□□ 0.43
PHGDH-221ENST00000641573 A0A1W2PP64 1363 aa17.73■□□□□ 0.43
PHGDH-221ENST00000641573 BRD4O60885 1362 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-221ENST00000641573 PXDNQ92626 1479 aa17.73■□□□□ 0.43
PHGDH-221ENST00000641573 GLI3P10071 1580 aa17.73■□□□□ 0.43
PHGDH-221ENST00000641573 CD163L1Q9NR16 1453 aa17.72■□□□□ 0.43
PHGDH-221ENST00000641573 FOXO3O43524 673 aa17.72■□□□□ 0.43
PHGDH-221ENST00000641573 HDGFL2Q7Z4V5 671 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-221ENST00000641573 USP32Q8NFA0 1604 aa17.72■□□□□ 0.43
PHGDH-221ENST00000641573 SEPT12Q8IYM1 358 aa17.71■□□□□ 0.43
PHGDH-221ENST00000641573 PPIP5K1Q6PFW1 1433 aa17.71■□□□□ 0.43
PHGDH-221ENST00000641573 ATP7BP35670 1465 aa17.7■□□□□ 0.42
PHGDH-221ENST00000641573 PSDA5PKW4 1024 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-221ENST00000641573 HAP1P54257 671 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-221ENST00000641573 SLIT2O94813 1529 aa17.7■□□□□ 0.42
PHGDH-221ENST00000641573 CGNL1Q0VF96 1302 aa17.7■□□□□ 0.42
PHGDH-221ENST00000641573 PRR36Q9H6K5 1346 aa17.7■□□□□ 0.42
PHGDH-221ENST00000641573 PPP2R1AP30153 589 aa17.69■□□□□ 0.42
PHGDH-221ENST00000641573 BAG6P46379 1132 aa17.69■□□□□ 0.42
PHGDH-221ENST00000641573 CCDC9Q9Y3X0 531 aaKnown RBP17.69■□□□□ 0.42
PHGDH-221ENST00000641573 CCDC61Q9Y6R9 512 aa17.69■□□□□ 0.42
PHGDH-221ENST00000641573 BRWD3Q6RI45 1802 aa17.69■□□□□ 0.42
PHGDH-221ENST00000641573 FAM9BQ8IZU0 186 aa17.68■□□□□ 0.42
PHGDH-221ENST00000641573 FMN2Q9NZ56 1722 aa17.67■□□□□ 0.42
PHGDH-221ENST00000641573 KRT27Q7Z3Y8 459 aa17.67■□□□□ 0.42
PHGDH-221ENST00000641573 NSD2O96028 1365 aa17.66■□□□□ 0.42
PHGDH-221ENST00000641573 A0A0G2JS52 829 aa17.66■□□□□ 0.42
PHGDH-221ENST00000641573 MYT1Q01538 1121 aa17.66■□□□□ 0.42
PHGDH-221ENST00000641573 MORC1Q86VD1 984 aa17.66■□□□□ 0.42
PHGDH-221ENST00000641573 PNISRQ8TF01 805 aaKnown RBP17.65■□□□□ 0.42
PHGDH-221ENST00000641573 CPSF1Q10570 1443 aaKnown RBP17.64■□□□□ 0.42
PHGDH-221ENST00000641573 NUTM2FA1L443 756 aa17.64■□□□□ 0.41
PHGDH-221ENST00000641573 VPS72Q15906 364 aa17.64■□□□□ 0.41
PHGDH-221ENST00000641573 TOPAZ1Q8N9V7 1692 aa17.64■□□□□ 0.41
PHGDH-221ENST00000641573 PLEKHG3A1L390 1219 aa17.63■□□□□ 0.41
PHGDH-221ENST00000641573 SPATA31A3Q5VYP0 1347 aa17.63■□□□□ 0.41
PHGDH-221ENST00000641573 ANKARQ7Z5J8 1434 aa17.62■□□□□ 0.41
PHGDH-221ENST00000641573 ZNF692Q9BU19 519 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-221ENST00000641573 EDC4Q6P2E9 1401 aaKnown RBP17.61■□□□□ 0.41
PHGDH-221ENST00000641573 FYB1O15117 783 aa17.6■□□□□ 0.41
PHGDH-221ENST00000641573 ONECUT3O60422 494 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-221ENST00000641573 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
PHGDH-221ENST00000641573 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
PHGDH-221ENST00000641573 KIF1AQ12756 1690 aa17.59■□□□□ 0.41
PHGDH-221ENST00000641573 ACEP12821 1306 aa17.59■□□□□ 0.41
PHGDH-221ENST00000641573 PLEKHG5O94827 1062 aa17.59■□□□□ 0.41
PHGDH-221ENST00000641573 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
PHGDH-221ENST00000641573 AKAP12Q02952 1782 aa17.58■□□□□ 0.41
PHGDH-221ENST00000641573 ITSN1Q15811 1721 aa17.58■□□□□ 0.41
PHGDH-221ENST00000641573 MON2Q7Z3U7 1717 aa17.58■□□□□ 0.41
PHGDH-221ENST00000641573 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.41
PHGDH-221ENST00000641573 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.41
PHGDH-221ENST00000641573 TNNT2P45379 298 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-221ENST00000641573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.58■□□□□ 0.4
PHGDH-221ENST00000641573 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-221ENST00000641573 PSME1Q06323 249 aa17.57■□□□□ 0.4
PHGDH-221ENST00000641573 R3HDM1Q15032 1099 aaKnown RBP17.57■□□□□ 0.4
PHGDH-221ENST00000641573 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
PHGDH-221ENST00000641573 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
PHGDH-221ENST00000641573 ANKRD26Q9UPS8 1709 aa17.56■□□□□ 0.4
PHGDH-221ENST00000641573 EN1Q05925 392 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-221ENST00000641573 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
PHGDH-221ENST00000641573 YY1P25490 414 aa17.55■□□□□ 0.4
PHGDH-221ENST00000641573 PMFBP1Q8TBY8 1022 aa17.55■□□□□ 0.4
PHGDH-221ENST00000641573 CABLES1Q8TDN4 633 aa17.55■□□□□ 0.4
PHGDH-221ENST00000641573 POLR3AO14802 1390 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms