RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 NSD2O96028 1365 aa17.61■□□□□ 0.41
PHGDH-220ENST00000641570 ROBO1Q9Y6N7 1651 aa17.6■□□□□ 0.41
PHGDH-220ENST00000641570 ARHGEF10O15013 1369 aa17.59■□□□□ 0.41
PHGDH-220ENST00000641570 CC2D1BQ5T0F9 858 aaKnown RBP17.59■□□□□ 0.41
PHGDH-220ENST00000641570 MORC1Q86VD1 984 aa17.59■□□□□ 0.41
PHGDH-220ENST00000641570 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.41
PHGDH-220ENST00000641570 CD163L1Q9NR16 1453 aa17.58■□□□□ 0.41
PHGDH-220ENST00000641570 SBNO1A3KN83 1393 aa17.58■□□□□ 0.4
PHGDH-220ENST00000641570 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
PHGDH-220ENST00000641570 LRRC59Q96AG4 307 aaKnown RBP17.58■□□□□ 0.4
PHGDH-220ENST00000641570 TNS3Q68CZ2 1445 aa17.57■□□□□ 0.4
PHGDH-220ENST00000641570 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
PHGDH-220ENST00000641570 NLRP6P59044 892 aa17.57■□□□□ 0.4
PHGDH-220ENST00000641570 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
PHGDH-220ENST00000641570 CARD14Q9BXL6 1004 aa17.56■□□□□ 0.4
PHGDH-220ENST00000641570 NME9Q86XW9 330 aa17.55■□□□□ 0.4
PHGDH-220ENST00000641570 GGNBP2Q9H3C7 697 aa17.55■□□□□ 0.4
PHGDH-220ENST00000641570 AKAP12Q02952 1782 aa17.55■□□□□ 0.4
PHGDH-220ENST00000641570 SOS2Q07890 1332 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-220ENST00000641570 NUTM2GQ5VZR2 741 aa17.54■□□□□ 0.4
PHGDH-220ENST00000641570 MON2Q7Z3U7 1717 aa17.54■□□□□ 0.4
PHGDH-220ENST00000641570 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-220ENST00000641570 RALBP1Q15311 655 aa17.53■□□□□ 0.4
PHGDH-220ENST00000641570 NPC1L1Q9UHC9 1359 aa17.53■□□□□ 0.4
PHGDH-220ENST00000641570 SPATA31A3Q5VYP0 1347 aa17.52■□□□□ 0.4
PHGDH-220ENST00000641570 PXDNQ92626 1479 aa17.52■□□□□ 0.4
PHGDH-220ENST00000641570 SOX12O15370 315 aa17.52■□□□□ 0.4
PHGDH-220ENST00000641570 TNNT2P45379 298 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-220ENST00000641570 KCNH5Q8NCM2 988 aa17.52■□□□□ 0.4
PHGDH-220ENST00000641570 FYB1O15117 783 aa17.51■□□□□ 0.39
PHGDH-220ENST00000641570 PER1O15534 1290 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-220ENST00000641570 PHLPP1O60346 1717 aa17.51■□□□□ 0.39
PHGDH-220ENST00000641570 AMER1Q5JTC6 1135 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-220ENST00000641570 NHSL1Q5SYE7 1610 aa17.5■□□□□ 0.39
PHGDH-220ENST00000641570 ZBTB7CA1YPR0 619 aa17.5■□□□□ 0.39
PHGDH-220ENST00000641570 ILDR1Q86SU0 546 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-220ENST00000641570 NRKQ7Z2Y5 1582 aa17.49■□□□□ 0.39
PHGDH-220ENST00000641570 FBXO41Q8TF61 875 aa17.49■□□□□ 0.39
PHGDH-220ENST00000641570 SSH2Q76I76 1423 aa17.48■□□□□ 0.39
PHGDH-220ENST00000641570 KIF20BQ96Q89 1820 aa17.48■□□□□ 0.39
PHGDH-220ENST00000641570 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
PHGDH-220ENST00000641570 JCADQ9P266 1359 aa17.47■□□□□ 0.39
PHGDH-220ENST00000641570 CFAP53Q96M91 514 aa17.46■□□□□ 0.39
PHGDH-220ENST00000641570 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-220ENST00000641570 HSPA1LP34931 641 aa17.45■□□□□ 0.38
PHGDH-220ENST00000641570 PRKRIP1Q9H875 184 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-220ENST00000641570 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
PHGDH-220ENST00000641570 AMPHP49418 695 aa17.44■□□□□ 0.38
PHGDH-220ENST00000641570 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
PHGDH-220ENST00000641570 OVOS2A0A0J9YW53 1432 aa17.44■□□□□ 0.38
PHGDH-220ENST00000641570 OVOS2Q6IE36 1432 aa17.44■□□□□ 0.38
PHGDH-220ENST00000641570 TRPM3Q9HCF6 1732 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-220ENST00000641570 PIK3C2AO00443 1686 aa17.43■□□□□ 0.38
PHGDH-220ENST00000641570 MEX3CQ5U5Q3 659 aaKnown RBP17.43■□□□□ 0.38
PHGDH-220ENST00000641570 PNPLA6Q8IY17 1366 aa17.42■□□□□ 0.38
PHGDH-220ENST00000641570 PARD3Q8TEW0 1356 aa17.42■□□□□ 0.38
PHGDH-220ENST00000641570 NUTM2BA6NNL0 878 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-220ENST00000641570 NUTM2EB1AL46 878 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-220ENST00000641570 GCP02774 474 aa17.42■□□□□ 0.38
PHGDH-220ENST00000641570 NUTM2AQ8IVF1 878 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-220ENST00000641570 COL16A1Q07092 1604 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-220ENST00000641570 USP19O94966 1318 aa17.42■□□□□ 0.38
PHGDH-220ENST00000641570 CABLES1Q8TDN4 633 aa17.4■□□□□ 0.38
PHGDH-220ENST00000641570 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
PHGDH-220ENST00000641570 SPATA31A6Q5VVP1 1343 aa17.4■□□□□ 0.38
PHGDH-220ENST00000641570 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
PHGDH-220ENST00000641570 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
PHGDH-220ENST00000641570 MED1Q15648 1581 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-220ENST00000641570 AATKQ6ZMQ8 1374 aa17.39■□□□□ 0.37
PHGDH-220ENST00000641570 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
PHGDH-220ENST00000641570 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
PHGDH-220ENST00000641570 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
PHGDH-220ENST00000641570 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
PHGDH-220ENST00000641570 SLIT3O75094 1523 aa17.37■□□□□ 0.37
PHGDH-220ENST00000641570 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
PHGDH-220ENST00000641570 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
PHGDH-220ENST00000641570 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
PHGDH-220ENST00000641570 RTL1A6NKG5 1358 aa17.36■□□□□ 0.37
PHGDH-220ENST00000641570 CSB-PGBD3P0DP91 1061 aa17.35■□□□□ 0.37
PHGDH-220ENST00000641570 MTHFSP49914 203 aa17.35■□□□□ 0.37
PHGDH-220ENST00000641570 FLT4P35916 1363 aa17.35■□□□□ 0.37
PHGDH-220ENST00000641570 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
PHGDH-220ENST00000641570 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
PHGDH-220ENST00000641570 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
PHGDH-220ENST00000641570 KIAA0232Q92628 1395 aa17.34■□□□□ 0.37
PHGDH-220ENST00000641570 EMILIN1Q9Y6C2 1016 aa17.34■□□□□ 0.37
PHGDH-220ENST00000641570 SHPRHQ149N8 1683 aa17.33■□□□□ 0.37
PHGDH-220ENST00000641570 USP54Q70EL1 1684 aa17.33■□□□□ 0.37
PHGDH-220ENST00000641570 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-220ENST00000641570 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
PHGDH-220ENST00000641570 EVA1CP58658 441 aa17.32■□□□□ 0.36
PHGDH-220ENST00000641570 MIER1Q8N108 512 aa17.32■□□□□ 0.36
PHGDH-220ENST00000641570 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
PHGDH-220ENST00000641570 PHRF1Q9P1Y6 1649 aaKnown RBP17.32■□□□□ 0.36
PHGDH-220ENST00000641570 CPDO75976 1380 aa17.31■□□□□ 0.36
PHGDH-220ENST00000641570 ARHGEF25Q86VW2 580 aa17.31■□□□□ 0.36
PHGDH-220ENST00000641570 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
PHGDH-220ENST00000641570 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-220ENST00000641570 DIAPH1O60610 1272 aaKnown RBP17.3■□□□□ 0.36
PHGDH-220ENST00000641570 NEFMP07197 916 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms