RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CPSF1Q10570 1443 aaKnown RBP11.8□□□□□ -0.52
PHGDH-219ENST00000641513 FYB1O15117 783 aa11.8□□□□□ -0.52
PHGDH-219ENST00000641513 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
PHGDH-219ENST00000641513 ZNF692Q9BU19 519 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-219ENST00000641513 ACEP12821 1306 aa11.8□□□□□ -0.52
PHGDH-219ENST00000641513 ZBED9Q6R2W3 1325 aa11.8□□□□□ -0.52
PHGDH-219ENST00000641513 NKTRP30414 1462 aaKnown RBP11.79□□□□□ -0.52
PHGDH-219ENST00000641513 MYT1Q01538 1121 aa11.79□□□□□ -0.52
PHGDH-219ENST00000641513 PROSER2Q86WR7 435 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-219ENST00000641513 NGDNQ8NEJ9 315 aaKnown RBP11.79□□□□□ -0.52
PHGDH-219ENST00000641513 PMFBP1Q8TBY8 1022 aa11.79□□□□□ -0.52
PHGDH-219ENST00000641513 INSRP06213 1382 aa11.79□□□□□ -0.52
PHGDH-219ENST00000641513 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
PHGDH-219ENST00000641513 MTHFSP49914 203 aa11.78□□□□□ -0.52
PHGDH-219ENST00000641513 NME9Q86XW9 330 aa11.78□□□□□ -0.52
PHGDH-219ENST00000641513 SALL2Q9Y467 1007 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-219ENST00000641513 ANKARQ7Z5J8 1434 aa11.77□□□□□ -0.52
PHGDH-219ENST00000641513 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.52
PHGDH-219ENST00000641513 ADAMTS8Q9UP79 889 aa11.77□□□□□ -0.53
PHGDH-219ENST00000641513 POLR3AO14802 1390 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-219ENST00000641513 BLMP54132 1417 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-219ENST00000641513 COG3Q96JB2 828 aa11.76□□□□□ -0.53
PHGDH-219ENST00000641513 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
PHGDH-219ENST00000641513 TTC21BQ7Z4L5 1316 aa11.75□□□□□ -0.53
PHGDH-219ENST00000641513 USP6P35125 1406 aa11.75□□□□□ -0.53
PHGDH-219ENST00000641513 XIRP1Q702N8 1843 aaKnown RBP11.74□□□□□ -0.53
PHGDH-219ENST00000641513 PPM1GO15355 546 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-219ENST00000641513 CCDC146Q8IYE0 955 aa11.74□□□□□ -0.53
PHGDH-219ENST00000641513 PIK3C2AO00443 1686 aa11.73□□□□□ -0.53
PHGDH-219ENST00000641513 FKBP8Q14318 412 aa11.73□□□□□ -0.53
PHGDH-219ENST00000641513 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
PHGDH-219ENST00000641513 SMG6Q86US8 1419 aaKnown RBP11.72□□□□□ -0.53
PHGDH-219ENST00000641513 ESCO1Q5FWF5 840 aa11.72□□□□□ -0.53
PHGDH-219ENST00000641513 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
PHGDH-219ENST00000641513 KIF1AQ12756 1690 aa11.71□□□□□ -0.53
PHGDH-219ENST00000641513 TTC21AQ8NDW8 1320 aa11.71□□□□□ -0.53
PHGDH-219ENST00000641513 U2SURPO15042 1029 aaKnown RBP11.71□□□□□ -0.53
PHGDH-219ENST00000641513 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-219ENST00000641513 MARF1Q9Y4F3 1742 aaKnown RBP11.7□□□□□ -0.54
PHGDH-219ENST00000641513 SOX12O15370 315 aa11.7□□□□□ -0.54
PHGDH-219ENST00000641513 U2AF1L5P0DN76 240 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-219ENST00000641513 ATF3P18847 181 aa11.7□□□□□ -0.54
PHGDH-219ENST00000641513 FBLN1P23142 703 aa11.7□□□□□ -0.54
PHGDH-219ENST00000641513 U2AF1Q01081 240 aaKnown RBP eCLIP11.7□□□□□ -0.54
PHGDH-219ENST00000641513 LTN1O94822 1766 aa11.69□□□□□ -0.54
PHGDH-219ENST00000641513 TMEM94Q12767 1356 aa11.69□□□□□ -0.54
PHGDH-219ENST00000641513 DIAPH1O60610 1272 aaKnown RBP11.69□□□□□ -0.54
PHGDH-219ENST00000641513 PSME1Q06323 249 aa11.69□□□□□ -0.54
PHGDH-219ENST00000641513 C19orf44Q9H6X5 657 aa11.69□□□□□ -0.54
PHGDH-219ENST00000641513 COL3A1P02461 1466 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-219ENST00000641513 APAF1O14727 1248 aa11.68□□□□□ -0.54
PHGDH-219ENST00000641513 RRS1Q15050 365 aaKnown RBP11.68□□□□□ -0.54
PHGDH-219ENST00000641513 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
PHGDH-219ENST00000641513 POLKQ9UBT6 870 aa11.68□□□□□ -0.54
PHGDH-219ENST00000641513 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
PHGDH-219ENST00000641513 USP54Q70EL1 1684 aa11.68□□□□□ -0.54
PHGDH-219ENST00000641513 OVOS2A0A0J9YW53 1432 aa11.68□□□□□ -0.54
PHGDH-219ENST00000641513 OVOS2Q6IE36 1432 aa11.68□□□□□ -0.54
PHGDH-219ENST00000641513 SSH2Q76I76 1423 aa11.68□□□□□ -0.54
PHGDH-219ENST00000641513 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
PHGDH-219ENST00000641513 RUNDC1Q96C34 613 aa11.67□□□□□ -0.54
PHGDH-219ENST00000641513 CDK12Q9NYV4 1490 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-219ENST00000641513 MSH6P52701 1360 aa11.67□□□□□ -0.54
PHGDH-219ENST00000641513 AATKQ6ZMQ8 1374 aa11.67□□□□□ -0.54
PHGDH-219ENST00000641513 PEAK1Q9H792 1746 aa11.66□□□□□ -0.54
PHGDH-219ENST00000641513 NLRP6P59044 892 aa11.66□□□□□ -0.54
PHGDH-219ENST00000641513 PDE3BQ13370 1112 aa11.66□□□□□ -0.54
PHGDH-219ENST00000641513 ABTB2Q8N961 1025 aa11.66□□□□□ -0.54
PHGDH-219ENST00000641513 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
PHGDH-219ENST00000641513 TRPM3Q9HCF6 1732 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-219ENST00000641513 C1orf167Q5SNV9 1468 aa11.65□□□□□ -0.54
PHGDH-219ENST00000641513 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
PHGDH-219ENST00000641513 NEUROD2Q15784 382 aa11.65□□□□□ -0.54
PHGDH-219ENST00000641513 NCOA3Q9Y6Q9 1424 aa11.65□□□□□ -0.54
PHGDH-219ENST00000641513 RNF123Q5XPI4 1314 aa11.64□□□□□ -0.55
PHGDH-219ENST00000641513 ZNF335Q9H4Z2 1342 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-219ENST00000641513 MAPK8IP3Q9UPT6 1336 aa11.64□□□□□ -0.55
PHGDH-219ENST00000641513 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
PHGDH-219ENST00000641513 XPCQ01831 940 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-219ENST00000641513 LMOD2Q6P5Q4 547 aa11.64□□□□□ -0.55
PHGDH-219ENST00000641513 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
PHGDH-219ENST00000641513 USP31Q70CQ4 1352 aa11.64□□□□□ -0.55
PHGDH-219ENST00000641513 DCCP43146 1447 aa11.63□□□□□ -0.55
PHGDH-219ENST00000641513 MST1RQ04912 1400 aa11.63□□□□□ -0.55
PHGDH-219ENST00000641513 FOXO3O43524 673 aa11.63□□□□□ -0.55
PHGDH-219ENST00000641513 NEFMP07197 916 aa11.63□□□□□ -0.55
PHGDH-219ENST00000641513 CADPS2Q86UW7 1296 aa11.63□□□□□ -0.55
PHGDH-219ENST00000641513 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
PHGDH-219ENST00000641513 RRP7AQ9Y3A4 280 aaKnown RBP11.63□□□□□ -0.55
PHGDH-219ENST00000641513 DMRT2Q9Y5R5 561 aa11.63□□□□□ -0.55
PHGDH-219ENST00000641513 LRRC7Q96NW7 1537 aa11.63□□□□□ -0.55
PHGDH-219ENST00000641513 PNPLA6Q8IY17 1366 aa11.63□□□□□ -0.55
PHGDH-219ENST00000641513 AMPHP49418 695 aa11.62□□□□□ -0.55
PHGDH-219ENST00000641513 KRT28Q7Z3Y7 464 aa11.62□□□□□ -0.55
PHGDH-219ENST00000641513 TCP11L2Q8N4U5 519 aa11.62□□□□□ -0.55
PHGDH-219ENST00000641513 PPP4R2Q9NY27 417 aa11.62□□□□□ -0.55
PHGDH-219ENST00000641513 ZBTB7CA1YPR0 619 aa11.61□□□□□ -0.55
PHGDH-219ENST00000641513 GOLGA2Q08379 1002 aa11.61□□□□□ -0.55
PHGDH-219ENST00000641513 NGEFQ8N5V2 710 aa11.61□□□□□ -0.55
PHGDH-219ENST00000641513 IQSEC2Q5JU85 1478 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms