RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-218ENST00000641491 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-218ENST00000641491 EDC4Q6P2E9 1401 aaKnown RBP17.66■□□□□ 0.42
PHGDH-218ENST00000641491 USP32Q8NFA0 1604 aa17.66■□□□□ 0.42
PHGDH-218ENST00000641491 CNGB1Q14028 1251 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-218ENST00000641491 KRT28Q7Z3Y7 464 aa17.66■□□□□ 0.42
PHGDH-218ENST00000641491 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.66■□□□□ 0.42
PHGDH-218ENST00000641491 COL16A1Q07092 1604 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-218ENST00000641491 ANP32CO43423 234 aa17.64■□□□□ 0.41
PHGDH-218ENST00000641491 XPCQ01831 940 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-218ENST00000641491 TTC21AQ8NDW8 1320 aa17.64■□□□□ 0.41
PHGDH-218ENST00000641491 USP6P35125 1406 aa17.64■□□□□ 0.41
PHGDH-218ENST00000641491 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
PHGDH-218ENST00000641491 MYOM1P52179 1685 aa17.63■□□□□ 0.41
PHGDH-218ENST00000641491 HAP1P54257 671 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-218ENST00000641491 ABTB2Q8N961 1025 aa17.62■□□□□ 0.41
PHGDH-218ENST00000641491 CPSF1Q10570 1443 aaKnown RBP17.62■□□□□ 0.41
PHGDH-218ENST00000641491 CDK12Q9NYV4 1490 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-218ENST00000641491 COG3Q96JB2 828 aa17.61■□□□□ 0.41
PHGDH-218ENST00000641491 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
PHGDH-218ENST00000641491 NSD2O96028 1365 aa17.61■□□□□ 0.41
PHGDH-218ENST00000641491 ARHGEF10O15013 1369 aa17.59■□□□□ 0.41
PHGDH-218ENST00000641491 CC2D1BQ5T0F9 858 aaKnown RBP17.59■□□□□ 0.41
PHGDH-218ENST00000641491 MORC1Q86VD1 984 aa17.59■□□□□ 0.41
PHGDH-218ENST00000641491 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.41
PHGDH-218ENST00000641491 CD163L1Q9NR16 1453 aa17.58■□□□□ 0.41
PHGDH-218ENST00000641491 SBNO1A3KN83 1393 aa17.58■□□□□ 0.4
PHGDH-218ENST00000641491 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
PHGDH-218ENST00000641491 LRRC59Q96AG4 307 aaKnown RBP17.58■□□□□ 0.4
PHGDH-218ENST00000641491 TNS3Q68CZ2 1445 aa17.57■□□□□ 0.4
PHGDH-218ENST00000641491 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
PHGDH-218ENST00000641491 NLRP6P59044 892 aa17.57■□□□□ 0.4
PHGDH-218ENST00000641491 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
PHGDH-218ENST00000641491 AHDC1Q5TGY3 1603 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-218ENST00000641491 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
PHGDH-218ENST00000641491 SHPRHQ149N8 1683 aa17.56■□□□□ 0.4
PHGDH-218ENST00000641491 CARD14Q9BXL6 1004 aa17.56■□□□□ 0.4
PHGDH-218ENST00000641491 NME9Q86XW9 330 aa17.55■□□□□ 0.4
PHGDH-218ENST00000641491 GGNBP2Q9H3C7 697 aa17.55■□□□□ 0.4
PHGDH-218ENST00000641491 AKAP12Q02952 1782 aa17.55■□□□□ 0.4
PHGDH-218ENST00000641491 AFF2P51816 1311 aa17.54■□□□□ 0.4
PHGDH-218ENST00000641491 SOS2Q07890 1332 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-218ENST00000641491 NUTM2BA6NNL0 878 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-218ENST00000641491 NUTM2EB1AL46 878 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-218ENST00000641491 NUTM2GQ5VZR2 741 aa17.54■□□□□ 0.4
PHGDH-218ENST00000641491 NUTM2AQ8IVF1 878 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-218ENST00000641491 MON2Q7Z3U7 1717 aa17.54■□□□□ 0.4
PHGDH-218ENST00000641491 RALBP1Q15311 655 aa17.53■□□□□ 0.4
PHGDH-218ENST00000641491 NPC1L1Q9UHC9 1359 aa17.53■□□□□ 0.4
PHGDH-218ENST00000641491 SPATA31A3Q5VYP0 1347 aa17.52■□□□□ 0.4
PHGDH-218ENST00000641491 PXDNQ92626 1479 aa17.52■□□□□ 0.4
PHGDH-218ENST00000641491 SOX12O15370 315 aa17.52■□□□□ 0.4
PHGDH-218ENST00000641491 TNNT2P45379 298 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-218ENST00000641491 RBM6P78332 1123 aaKnown RBP17.52■□□□□ 0.4
PHGDH-218ENST00000641491 KCNH5Q8NCM2 988 aa17.52■□□□□ 0.4
PHGDH-218ENST00000641491 FYB1O15117 783 aa17.51■□□□□ 0.39
PHGDH-218ENST00000641491 PER1O15534 1290 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-218ENST00000641491 AMER1Q5JTC6 1135 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-218ENST00000641491 NHSL1Q5SYE7 1610 aa17.5■□□□□ 0.39
PHGDH-218ENST00000641491 ZBTB7CA1YPR0 619 aa17.5■□□□□ 0.39
PHGDH-218ENST00000641491 QTRT2Q9H974 415 aaKnown RBP17.5■□□□□ 0.39
PHGDH-218ENST00000641491 NRKQ7Z2Y5 1582 aa17.49■□□□□ 0.39
PHGDH-218ENST00000641491 SSH2Q76I76 1423 aa17.48■□□□□ 0.39
PHGDH-218ENST00000641491 KIF20BQ96Q89 1820 aa17.48■□□□□ 0.39
PHGDH-218ENST00000641491 RGS12O14924 1447 aa17.47■□□□□ 0.39
PHGDH-218ENST00000641491 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
PHGDH-218ENST00000641491 CFAP53Q96M91 514 aa17.46■□□□□ 0.39
PHGDH-218ENST00000641491 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-218ENST00000641491 C8orf37Q96NL8 207 aa17.45■□□□□ 0.38
PHGDH-218ENST00000641491 PRKRIP1Q9H875 184 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-218ENST00000641491 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
PHGDH-218ENST00000641491 AMPHP49418 695 aa17.44■□□□□ 0.38
PHGDH-218ENST00000641491 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
PHGDH-218ENST00000641491 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
PHGDH-218ENST00000641491 OVOS2A0A0J9YW53 1432 aa17.44■□□□□ 0.38
PHGDH-218ENST00000641491 OVOS2Q6IE36 1432 aa17.44■□□□□ 0.38
PHGDH-218ENST00000641491 TRPM3Q9HCF6 1732 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-218ENST00000641491 PIK3C2AO00443 1686 aa17.43■□□□□ 0.38
PHGDH-218ENST00000641491 PNPLA6Q8IY17 1366 aa17.42■□□□□ 0.38
PHGDH-218ENST00000641491 PARD3Q8TEW0 1356 aa17.42■□□□□ 0.38
PHGDH-218ENST00000641491 GCP02774 474 aa17.42■□□□□ 0.38
PHGDH-218ENST00000641491 USP19O94966 1318 aa17.42■□□□□ 0.38
PHGDH-218ENST00000641491 CABLES1Q8TDN4 633 aa17.4■□□□□ 0.38
PHGDH-218ENST00000641491 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
PHGDH-218ENST00000641491 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
PHGDH-218ENST00000641491 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
PHGDH-218ENST00000641491 AATKQ6ZMQ8 1374 aa17.39■□□□□ 0.37
PHGDH-218ENST00000641491 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
PHGDH-218ENST00000641491 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
PHGDH-218ENST00000641491 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
PHGDH-218ENST00000641491 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
PHGDH-218ENST00000641491 SLIT3O75094 1523 aa17.37■□□□□ 0.37
PHGDH-218ENST00000641491 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
PHGDH-218ENST00000641491 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
PHGDH-218ENST00000641491 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
PHGDH-218ENST00000641491 RTL1A6NKG5 1358 aa17.36■□□□□ 0.37
PHGDH-218ENST00000641491 CSB-PGBD3P0DP91 1061 aa17.35■□□□□ 0.37
PHGDH-218ENST00000641491 MTHFSP49914 203 aa17.35■□□□□ 0.37
PHGDH-218ENST00000641491 FLT4P35916 1363 aa17.35■□□□□ 0.37
PHGDH-218ENST00000641491 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms