RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 RGPD8O14715 1765 aaPredicted RBP21.72■■□□□ 1.07
PHGDH-216ENST00000641375 MAP2P11137 1827 aaKnown RBP21.72■■□□□ 1.07
PHGDH-216ENST00000641375 ERICH6BQ5W0A0 696 aa21.71■■□□□ 1.07
PHGDH-216ENST00000641375 COG3Q96JB2 828 aa21.71■■□□□ 1.07
PHGDH-216ENST00000641375 COL3A1P02461 1466 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-216ENST00000641375 PNPLA6Q8IY17 1366 aa21.71■■□□□ 1.07
PHGDH-216ENST00000641375 USP6P35125 1406 aa21.71■■□□□ 1.07
PHGDH-216ENST00000641375 APAF1O14727 1248 aa21.71■■□□□ 1.07
PHGDH-216ENST00000641375 NME9Q86XW9 330 aa21.71■■□□□ 1.07
PHGDH-216ENST00000641375 NALCNQ8IZF0 1738 aa21.7■■□□□ 1.06
PHGDH-216ENST00000641375 RUNDC1Q96C34 613 aa21.7■■□□□ 1.06
PHGDH-216ENST00000641375 ZNF521Q96K83 1311 aa21.7■■□□□ 1.06
PHGDH-216ENST00000641375 AATKQ6ZMQ8 1374 aa21.69■■□□□ 1.06
PHGDH-216ENST00000641375 CDCA7LQ96GN5 454 aa21.68■■□□□ 1.06
PHGDH-216ENST00000641375 TTC21BQ7Z4L5 1316 aa21.68■■□□□ 1.06
PHGDH-216ENST00000641375 NWD1Q149M9 1564 aa21.68■■□□□ 1.06
PHGDH-216ENST00000641375 RNF123Q5XPI4 1314 aa21.67■■□□□ 1.06
PHGDH-216ENST00000641375 U2AF1L5P0DN76 240 aaPredicted RBP21.67■■□□□ 1.06
PHGDH-216ENST00000641375 U2AF1Q01081 240 aaKnown RBP eCLIP21.67■■□□□ 1.06
PHGDH-216ENST00000641375 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
PHGDH-216ENST00000641375 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
PHGDH-216ENST00000641375 DIAPH1O60610 1272 aaKnown RBP21.65■■□□□ 1.06
PHGDH-216ENST00000641375 SSH2Q76I76 1423 aa21.65■■□□□ 1.06
PHGDH-216ENST00000641375 ADGRL3Q9HAR2 1447 aa21.65■■□□□ 1.06
PHGDH-216ENST00000641375 TTC21AQ8NDW8 1320 aa21.65■■□□□ 1.06
PHGDH-216ENST00000641375 NGDNQ8NEJ9 315 aaKnown RBP21.65■■□□□ 1.06
PHGDH-216ENST00000641375 BCL11AQ9H165 835 aa21.65■■□□□ 1.06
PHGDH-216ENST00000641375 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.05
PHGDH-216ENST00000641375 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.05
PHGDH-216ENST00000641375 PMFBP1Q8TBY8 1022 aa21.64■■□□□ 1.05
PHGDH-216ENST00000641375 CDK12Q9NYV4 1490 aaPredicted RBP21.63■■□□□ 1.05
PHGDH-216ENST00000641375 ZRANB1Q9UGI0 708 aa21.63■■□□□ 1.05
PHGDH-216ENST00000641375 RCAN3Q9UKA8 241 aa21.63■■□□□ 1.05
PHGDH-216ENST00000641375 OVOS2A0A0J9YW53 1432 aa21.62■■□□□ 1.05
PHGDH-216ENST00000641375 OVOS2Q6IE36 1432 aa21.62■■□□□ 1.05
PHGDH-216ENST00000641375 U2SURPO15042 1029 aaKnown RBP21.62■■□□□ 1.05
PHGDH-216ENST00000641375 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-216ENST00000641375 PNNQ9H307 717 aaKnown RBP21.61■■□□□ 1.05
PHGDH-216ENST00000641375 PPM1GO15355 546 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-216ENST00000641375 TCP11L2Q8N4U5 519 aa21.61■■□□□ 1.05
PHGDH-216ENST00000641375 SLFN5Q08AF3 891 aa21.59■■□□□ 1.05
PHGDH-216ENST00000641375 DUSP27Q5VZP5 1158 aa21.59■■□□□ 1.05
PHGDH-216ENST00000641375 FBLN1P23142 703 aa21.58■■□□□ 1.05
PHGDH-216ENST00000641375 EMILIN1Q9Y6C2 1016 aa21.58■■□□□ 1.05
PHGDH-216ENST00000641375 E9PSI1 815 aa21.58■■□□□ 1.04
PHGDH-216ENST00000641375 CCDC27Q2M243 656 aa21.58■■□□□ 1.04
PHGDH-216ENST00000641375 WWC1Q8IX03 1113 aa21.58■■□□□ 1.04
PHGDH-216ENST00000641375 USP31Q70CQ4 1352 aa21.57■■□□□ 1.04
PHGDH-216ENST00000641375 C14orf37Q86TY3 774 aa21.57■■□□□ 1.04
PHGDH-216ENST00000641375 TRMT2AQ8IZ69 625 aaKnown RBP21.57■■□□□ 1.04
PHGDH-216ENST00000641375 PLEKHF1Q96S99 279 aa21.55■■□□□ 1.04
PHGDH-216ENST00000641375 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
PHGDH-216ENST00000641375 FCHSD2O94868 740 aa21.55■■□□□ 1.04
PHGDH-216ENST00000641375 RBM33Q96EV2 1170 aaKnown RBP21.55■■□□□ 1.04
PHGDH-216ENST00000641375 ANP32EQ9BTT0 268 aa21.55■■□□□ 1.04
PHGDH-216ENST00000641375 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
PHGDH-216ENST00000641375 PHF8Q9UPP1 1060 aa21.54■■□□□ 1.04
PHGDH-216ENST00000641375 PIK3C2AO00443 1686 aa21.54■■□□□ 1.04
PHGDH-216ENST00000641375 RRP1P56182 461 aaKnown RBP21.54■■□□□ 1.04
PHGDH-216ENST00000641375 RRS1Q15050 365 aaKnown RBP21.54■■□□□ 1.04
PHGDH-216ENST00000641375 NEUROD2Q15784 382 aa21.54■■□□□ 1.04
PHGDH-216ENST00000641375 KDM4FA0A1W2PPD8 638 aa21.53■■□□□ 1.04
PHGDH-216ENST00000641375 PROSER2Q86WR7 435 aaPredicted RBP21.53■■□□□ 1.04
PHGDH-216ENST00000641375 WDR63Q8IWG1 891 aa21.53■■□□□ 1.04
PHGDH-216ENST00000641375 PPP4R2Q9NY27 417 aa21.53■■□□□ 1.04
PHGDH-216ENST00000641375 USP54Q70EL1 1684 aa21.52■■□□□ 1.04
PHGDH-216ENST00000641375 RRP7AQ9Y3A4 280 aaKnown RBP21.52■■□□□ 1.04
PHGDH-216ENST00000641375 IL13P35225 146 aa21.51■■□□□ 1.03
PHGDH-216ENST00000641375 NEFMP07197 916 aa21.51■■□□□ 1.03
PHGDH-216ENST00000641375 LRRC7Q96NW7 1537 aa21.5■■□□□ 1.03
PHGDH-216ENST00000641375 SPINK5Q9NQ38 1064 aaPredicted RBP21.49■■□□□ 1.03
PHGDH-216ENST00000641375 TMPOP42166 694 aaKnown RBP21.48■■□□□ 1.03
PHGDH-216ENST00000641375 ESCO1Q5FWF5 840 aa21.48■■□□□ 1.03
PHGDH-216ENST00000641375 RSPH6AQ9H0K4 717 aa21.48■■□□□ 1.03
PHGDH-216ENST00000641375 HSPA2P54652 639 aa21.48■■□□□ 1.03
PHGDH-216ENST00000641375 C19orf44Q9H6X5 657 aa21.48■■□□□ 1.03
PHGDH-216ENST00000641375 NCOA3Q9Y6Q9 1424 aa21.48■■□□□ 1.03
PHGDH-216ENST00000641375 LMTK3Q96Q04 1460 aa21.47■■□□□ 1.03
PHGDH-216ENST00000641375 NLRP6P59044 892 aa21.47■■□□□ 1.03
PHGDH-216ENST00000641375 DMRT2Q9Y5R5 561 aa21.47■■□□□ 1.03
PHGDH-216ENST00000641375 STRCP1A6NGW2 1772 aa21.46■■□□□ 1.03
PHGDH-216ENST00000641375 ABTB2Q8N961 1025 aa21.46■■□□□ 1.03
PHGDH-216ENST00000641375 PEAK1Q9H792 1746 aa21.45■■□□□ 1.02
PHGDH-216ENST00000641375 MARF1Q9Y4F3 1742 aaKnown RBP21.45■■□□□ 1.02
PHGDH-216ENST00000641375 PRKAR2BP31323 418 aa21.45■■□□□ 1.02
PHGDH-216ENST00000641375 PAK3O75914 559 aaPredicted RBP21.44■■□□□ 1.02
PHGDH-216ENST00000641375 PSME1Q06323 249 aa21.44■■□□□ 1.02
PHGDH-216ENST00000641375 SBNO1A3KN83 1393 aa21.43■■□□□ 1.02
PHGDH-216ENST00000641375 KIF1AQ12756 1690 aa21.43■■□□□ 1.02
PHGDH-216ENST00000641375 DCCP43146 1447 aa21.43■■□□□ 1.02
PHGDH-216ENST00000641375 FLT4P35916 1363 aa21.43■■□□□ 1.02
PHGDH-216ENST00000641375 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
PHGDH-216ENST00000641375 MYH16Q9H6N6 1097 aa21.43■■□□□ 1.02
PHGDH-216ENST00000641375 HMOX1P09601 288 aa21.42■■□□□ 1.02
PHGDH-216ENST00000641375 RIPK4P57078 832 aa21.42■■□□□ 1.02
PHGDH-216ENST00000641375 MAP3K19Q56UN5 1328 aa21.42■■□□□ 1.02
PHGDH-216ENST00000641375 TMEM94Q12767 1356 aa21.42■■□□□ 1.02
PHGDH-216ENST00000641375 STRCQ7RTU9 1775 aa21.42■■□□□ 1.02
PHGDH-216ENST00000641375 EIF4A2Q14240 407 aaKnown RBP21.41■■□□□ 1.02
PHGDH-216ENST00000641375 SOX12O15370 315 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms