RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 CTHP32929 405 aa10.03□□□□□ -0.8
AP3S1-209ENST00000640413 TBC1D2Q9BYX2 928 aa10.03□□□□□ -0.8
AP3S1-209ENST00000640413 PCDHB15Q9Y5E8 787 aa10.03□□□□□ -0.8
AP3S1-209ENST00000640413 PLEKHG3A1L390 1219 aa10.02□□□□□ -0.81
AP3S1-209ENST00000640413 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.81
AP3S1-209ENST00000640413 RSBN1LQ6PCB5 846 aaPredicted RBP10.01□□□□□ -0.81
AP3S1-209ENST00000640413 LYPD8Q6UX82 237 aa10.01□□□□□ -0.81
AP3S1-209ENST00000640413 CFAP99D6REC4 459 aa10□□□□□ -0.81
AP3S1-209ENST00000640413 IRF7Q92985 503 aa10□□□□□ -0.81
AP3S1-209ENST00000640413 H3BM21 787 aa9.99□□□□□ -0.81
AP3S1-209ENST00000640413 TIMP2P16035 220 aa9.99□□□□□ -0.81
AP3S1-209ENST00000640413 WDR4P57081 412 aaKnown RBP9.99□□□□□ -0.81
AP3S1-209ENST00000640413 MRPL14Q6P1L8 145 aaKnown RBP9.99□□□□□ -0.81
AP3S1-209ENST00000640413 NPAS3Q8IXF0 933 aa9.99□□□□□ -0.81
AP3S1-209ENST00000640413 MPNDQ8N594 471 aa9.99□□□□□ -0.81
AP3S1-209ENST00000640413 FOXJ1Q92949 421 aa9.99□□□□□ -0.81
AP3S1-209ENST00000640413 PURBQ96QR8 312 aaKnown RBP9.99□□□□□ -0.81
AP3S1-209ENST00000640413 MAP10Q9P2G4 905 aa9.99□□□□□ -0.81
AP3S1-209ENST00000640413 ERBB4Q15303 1308 aa9.99□□□□□ -0.81
AP3S1-209ENST00000640413 PARP9Q8IXQ6 854 aa9.98□□□□□ -0.81
AP3S1-209ENST00000640413 SOBPA7XYQ1 873 aa9.97□□□□□ -0.81
AP3S1-209ENST00000640413 ADH1CP00326 375 aa9.97□□□□□ -0.81
AP3S1-209ENST00000640413 HRCP23327 699 aa9.97□□□□□ -0.81
AP3S1-209ENST00000640413 LORP23490 312 aaPredicted RBP9.97□□□□□ -0.81
AP3S1-209ENST00000640413 GJA5P36382 358 aa9.97□□□□□ -0.81
AP3S1-209ENST00000640413 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
AP3S1-209ENST00000640413 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
AP3S1-209ENST00000640413 SPTLC1O15269 473 aa9.96□□□□□ -0.82
AP3S1-209ENST00000640413 SCARF1Q14162 830 aa9.96□□□□□ -0.82
AP3S1-209ENST00000640413 ZSCAN1Q8NBB4 408 aa9.96□□□□□ -0.82
AP3S1-209ENST00000640413 CABLES1Q8TDN4 633 aa9.96□□□□□ -0.82
AP3S1-209ENST00000640413 KLF16Q9BXK1 252 aaPredicted RBP9.96□□□□□ -0.82
AP3S1-209ENST00000640413 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
AP3S1-209ENST00000640413 ZBTB3Q9H5J0 574 aa9.95□□□□□ -0.82
AP3S1-209ENST00000640413 TRIM66O15016 1216 aa9.94□□□□□ -0.82
AP3S1-209ENST00000640413 F12P00748 615 aaPredicted RBP9.94□□□□□ -0.82
AP3S1-209ENST00000640413 DIXDC1Q155Q3 683 aa9.94□□□□□ -0.82
AP3S1-209ENST00000640413 RIC3Q7Z5B4 369 aa9.94□□□□□ -0.82
AP3S1-209ENST00000640413 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
AP3S1-209ENST00000640413 FAM181BA6NEQ2 426 aa9.93□□□□□ -0.82
AP3S1-209ENST00000640413 PER1O15534 1290 aaPredicted RBP9.93□□□□□ -0.82
AP3S1-209ENST00000640413 C4orf48Q5BLP8 95 aa9.93□□□□□ -0.82
AP3S1-209ENST00000640413 CDK15Q96Q40 435 aa9.93□□□□□ -0.82
AP3S1-209ENST00000640413 ZIC2O95409 532 aaPredicted RBP9.92□□□□□ -0.82
AP3S1-209ENST00000640413 AGERQ15109 404 aa9.92□□□□□ -0.82
AP3S1-209ENST00000640413 NR3C2P08235 984 aa9.91□□□□□ -0.82
AP3S1-209ENST00000640413 C6orf118Q5T5N4 469 aa9.91□□□□□ -0.82
AP3S1-209ENST00000640413 TSC1Q92574 1164 aa9.91□□□□□ -0.82
AP3S1-209ENST00000640413 ITPKCQ96DU7 683 aa9.91□□□□□ -0.82
AP3S1-209ENST00000640413 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
AP3S1-209ENST00000640413 GRM5P41594 1212 aa9.89□□□□□ -0.83
AP3S1-209ENST00000640413 LIMD1Q9UGP4 676 aa9.89□□□□□ -0.83
AP3S1-209ENST00000640413 QPCTQ16769 361 aa9.88□□□□□ -0.83
AP3S1-209ENST00000640413 AK7Q96M32 723 aa9.88□□□□□ -0.83
AP3S1-209ENST00000640413 NR5A1Q13285 461 aa9.87□□□□□ -0.83
AP3S1-209ENST00000640413 BPHLQ86WA6 291 aaPredicted RBP9.87□□□□□ -0.83
AP3S1-209ENST00000640413 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
AP3S1-209ENST00000640413 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
AP3S1-209ENST00000640413 MAN1A2O60476 641 aa9.86□□□□□ -0.83
AP3S1-209ENST00000640413 NUTM2DQ5VT03 806 aaPredicted RBP9.86□□□□□ -0.83
AP3S1-209ENST00000640413 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
AP3S1-209ENST00000640413 MYSM1Q5VVJ2 828 aa9.85□□□□□ -0.83
AP3S1-209ENST00000640413 BMP2P12643 396 aa9.84□□□□□ -0.83
AP3S1-209ENST00000640413 LILRB3O75022 631 aa9.83□□□□□ -0.84
AP3S1-209ENST00000640413 VSIG8P0DPA2 414 aa9.83□□□□□ -0.84
AP3S1-209ENST00000640413 FSHRP23945 695 aa9.82□□□□□ -0.84
AP3S1-209ENST00000640413 PDE4DQ08499 809 aa9.82□□□□□ -0.84
AP3S1-209ENST00000640413 RTL5Q5HYW3 569 aaPredicted RBP9.82□□□□□ -0.84
AP3S1-209ENST00000640413 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
AP3S1-209ENST00000640413 PPFIA3O75145 1194 aa9.81□□□□□ -0.84
AP3S1-209ENST00000640413 UPP2O95045 317 aa9.81□□□□□ -0.84
AP3S1-209ENST00000640413 SH3RF1Q7Z6J0 888 aa9.81□□□□□ -0.84
AP3S1-209ENST00000640413 MEIOBQ8N635 442 aa9.81□□□□□ -0.84
AP3S1-209ENST00000640413 C1QTNF2Q9BXJ5 285 aa9.81□□□□□ -0.84
AP3S1-209ENST00000640413 MAGEB6P1A0A0J9YX57 407 aa9.8□□□□□ -0.84
AP3S1-209ENST00000640413 VASH1Q7L8A9 365 aaPredicted RBP9.8□□□□□ -0.84
AP3S1-209ENST00000640413 ARMC2Q8NEN0 867 aa9.8□□□□□ -0.84
AP3S1-209ENST00000640413 TUSC1Q2TAM9 212 aa9.79□□□□□ -0.84
AP3S1-209ENST00000640413 SH3BP5LQ7L8J4 393 aa9.79□□□□□ -0.84
AP3S1-209ENST00000640413 DNMT3LQ9UJW3 386 aa9.79□□□□□ -0.84
AP3S1-209ENST00000640413 SOS2Q07890 1332 aaPredicted RBP9.79□□□□□ -0.84
AP3S1-209ENST00000640413 NBPF14Q5TI25 921 aa9.78□□□□□ -0.84
AP3S1-209ENST00000640413 CARD14Q9BXL6 1004 aa9.78□□□□□ -0.84
AP3S1-209ENST00000640413 HELBQ8NG08 1087 aaPredicted RBP9.77□□□□□ -0.85
AP3S1-209ENST00000640413 MAP4K5Q9Y4K4 846 aa9.77□□□□□ -0.85
AP3S1-209ENST00000640413 TRMT44Q8IYL2 757 aaKnown RBP9.76□□□□□ -0.85
AP3S1-209ENST00000640413 CLK2P49760 499 aaKnown RBP9.75□□□□□ -0.85
AP3S1-209ENST00000640413 CCDC116Q8IYX3 515 aa9.75□□□□□ -0.85
AP3S1-209ENST00000640413 SLC24A3Q9HC58 644 aa9.75□□□□□ -0.85
AP3S1-209ENST00000640413 POLR3EQ9NVU0 708 aa9.75□□□□□ -0.85
AP3S1-209ENST00000640413 TSEN34Q9BSV6 310 aaKnown RBP9.74□□□□□ -0.85
AP3S1-209ENST00000640413 EMILIN1Q9Y6C2 1016 aa9.74□□□□□ -0.85
AP3S1-209ENST00000640413 ERFEQ4G0M1 354 aa9.73□□□□□ -0.85
AP3S1-209ENST00000640413 FIGNL2A6NMB9 653 aa9.72□□□□□ -0.85
AP3S1-209ENST00000640413 CTDSPL2Q05D32 466 aa9.72□□□□□ -0.85
AP3S1-209ENST00000640413 CBLBQ13191 982 aa9.72□□□□□ -0.85
AP3S1-209ENST00000640413 GPR161Q8N6U8 529 aaKnown RBP9.72□□□□□ -0.85
AP3S1-209ENST00000640413 TTLL8A6PVC2 850 aa9.71□□□□□ -0.86
AP3S1-209ENST00000640413 PPP1R26Q5T8A7 1209 aaPredicted RBP9.71□□□□□ -0.86
AP3S1-209ENST00000640413 KRT76Q01546 638 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms