RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 PRKAR2BP31323 418 aa9.82□□□□□ -0.84
NECAP1-224ENST00000640099 NME9Q86XW9 330 aa9.82□□□□□ -0.84
NECAP1-224ENST00000640099 ABCC11Q96J66 1382 aa9.81□□□□□ -0.84
NECAP1-224ENST00000640099 MYO5BQ9ULV0 1848 aa9.81□□□□□ -0.84
NECAP1-224ENST00000640099 PLEKHF1Q96S99 279 aa9.81□□□□□ -0.84
NECAP1-224ENST00000640099 ARHGEF28Q8N1W1 1705 aaKnown RBP9.81□□□□□ -0.84
NECAP1-224ENST00000640099 RRS1Q15050 365 aaKnown RBP9.81□□□□□ -0.84
NECAP1-224ENST00000640099 ZKSCAN2Q63HK3 967 aa9.81□□□□□ -0.84
NECAP1-224ENST00000640099 DZIP1LQ8IYY4 767 aaKnown RBP9.81□□□□□ -0.84
NECAP1-224ENST00000640099 NOB1Q9ULX3 412 aaKnown RBP9.81□□□□□ -0.84
NECAP1-224ENST00000640099 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
NECAP1-224ENST00000640099 IQSEC2Q5JU85 1478 aa9.8□□□□□ -0.84
NECAP1-224ENST00000640099 ATAD2Q6PL18 1390 aa9.8□□□□□ -0.84
NECAP1-224ENST00000640099 PTPRMP28827 1452 aa9.8□□□□□ -0.84
NECAP1-224ENST00000640099 TRIM27P14373 513 aa9.8□□□□□ -0.84
NECAP1-224ENST00000640099 PHACTR3Q96KR7 559 aa9.8□□□□□ -0.84
NECAP1-224ENST00000640099 SPRYD3Q8NCJ5 442 aa9.79□□□□□ -0.84
NECAP1-224ENST00000640099 ARHGAP31Q2M1Z3 1444 aa9.79□□□□□ -0.84
NECAP1-224ENST00000640099 MVPQ14764 893 aaKnown RBP9.79□□□□□ -0.84
NECAP1-224ENST00000640099 CCDC27Q2M243 656 aa9.79□□□□□ -0.84
NECAP1-224ENST00000640099 POLKQ9UBT6 870 aa9.79□□□□□ -0.84
NECAP1-224ENST00000640099 NSD2O96028 1365 aa9.79□□□□□ -0.84
NECAP1-224ENST00000640099 RICTORQ6R327 1708 aa9.78□□□□□ -0.84
NECAP1-224ENST00000640099 PMFBP1Q8TBY8 1022 aa9.78□□□□□ -0.84
NECAP1-224ENST00000640099 SLKQ9H2G2 1235 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-224ENST00000640099 NFKBIBQ15653 356 aa9.78□□□□□ -0.84
NECAP1-224ENST00000640099 TMEM57Q8N5G2 664 aa9.78□□□□□ -0.84
NECAP1-224ENST00000640099 PUS7Q96PZ0 661 aaKnown RBP9.78□□□□□ -0.84
NECAP1-224ENST00000640099 CD163L1Q9NR16 1453 aa9.77□□□□□ -0.84
NECAP1-224ENST00000640099 DCTN1Q14203 1278 aa9.77□□□□□ -0.84
NECAP1-224ENST00000640099 RWDD1Q9H446 243 aaPredicted RBP9.77□□□□□ -0.84
NECAP1-224ENST00000640099 C1orf115Q9H7X2 142 aa9.77□□□□□ -0.85
NECAP1-224ENST00000640099 RIMS2Q9UQ26 1411 aa9.77□□□□□ -0.85
NECAP1-224ENST00000640099 TMEM131LA2VDJ0 1609 aa9.76□□□□□ -0.85
NECAP1-224ENST00000640099 FAM83GA6ND36 823 aa9.76□□□□□ -0.85
NECAP1-224ENST00000640099 PREX1Q8TCU6 1659 aa9.76□□□□□ -0.85
NECAP1-224ENST00000640099 METP08581 1390 aa9.76□□□□□ -0.85
NECAP1-224ENST00000640099 ALKQ9UM73 1620 aa9.76□□□□□ -0.85
NECAP1-224ENST00000640099 TSPYL6Q8N831 410 aa9.76□□□□□ -0.85
NECAP1-224ENST00000640099 USP19O94966 1318 aa9.76□□□□□ -0.85
NECAP1-224ENST00000640099 FRAT2O75474 233 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-224ENST00000640099 CEBPAP49715 358 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-224ENST00000640099 ATF7IPQ6VMQ6 1270 aa9.76□□□□□ -0.85
NECAP1-224ENST00000640099 NUDT16Q96DE0 195 aaKnown RBP9.76□□□□□ -0.85
NECAP1-224ENST00000640099 WASLO00401 505 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-224ENST00000640099 ZFYVE9O95405 1425 aa9.75□□□□□ -0.85
NECAP1-224ENST00000640099 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
NECAP1-224ENST00000640099 MFAP1P55081 439 aaKnown RBP9.74□□□□□ -0.85
NECAP1-224ENST00000640099 SLC26A8Q96RN1 970 aa9.74□□□□□ -0.85
NECAP1-224ENST00000640099 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
NECAP1-224ENST00000640099 NINLQ9Y2I6 1382 aa9.74□□□□□ -0.85
NECAP1-224ENST00000640099 ARHGEF40Q8TER5 1519 aa9.73□□□□□ -0.85
NECAP1-224ENST00000640099 FCHSD2O94868 740 aa9.73□□□□□ -0.85
NECAP1-224ENST00000640099 COG3Q96JB2 828 aa9.73□□□□□ -0.85
NECAP1-224ENST00000640099 LNPKQ9C0E8 428 aa9.73□□□□□ -0.85
NECAP1-224ENST00000640099 A2ML1A8K2U0 1454 aa9.73□□□□□ -0.85
NECAP1-224ENST00000640099 NLRP1Q9C000 1473 aa9.73□□□□□ -0.85
NECAP1-224ENST00000640099 PPIP5K1Q6PFW1 1433 aa9.73□□□□□ -0.85
NECAP1-224ENST00000640099 COL3A1P02461 1466 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-224ENST00000640099 AEBP1Q8IUX7 1158 aa9.72□□□□□ -0.85
NECAP1-224ENST00000640099 KRT24Q2M2I5 525 aa9.72□□□□□ -0.85
NECAP1-224ENST00000640099 NFE2L2Q16236 605 aa9.72□□□□□ -0.85
NECAP1-224ENST00000640099 UPF2Q9HAU5 1272 aaKnown RBP9.72□□□□□ -0.85
NECAP1-224ENST00000640099 DDX19BQ9UMR2 479 aa9.72□□□□□ -0.85
NECAP1-224ENST00000640099 USP32Q8NFA0 1604 aa9.72□□□□□ -0.85
NECAP1-224ENST00000640099 ZMYM3Q14202 1370 aa9.71□□□□□ -0.85
NECAP1-224ENST00000640099 CLTCQ00610 1675 aaKnown RBP9.71□□□□□ -0.85
NECAP1-224ENST00000640099 PLEKHG5O94827 1062 aa9.71□□□□□ -0.85
NECAP1-224ENST00000640099 IL27Q8NEV9 243 aa9.71□□□□□ -0.86
NECAP1-224ENST00000640099 PNNQ9H307 717 aaKnown RBP9.71□□□□□ -0.86
NECAP1-224ENST00000640099 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.86
NECAP1-224ENST00000640099 IL13P35225 146 aa9.71□□□□□ -0.86
NECAP1-224ENST00000640099 ARXQ96QS3 562 aa9.71□□□□□ -0.86
NECAP1-224ENST00000640099 MBIPQ9NS73 344 aa9.71□□□□□ -0.86
NECAP1-224ENST00000640099 PRR36Q9H6K5 1346 aa9.7□□□□□ -0.86
NECAP1-224ENST00000640099 C8orf58Q8NAV2 365 aa9.7□□□□□ -0.86
NECAP1-224ENST00000640099 IPO8O15397 1037 aaKnown RBP9.7□□□□□ -0.86
NECAP1-224ENST00000640099 SULT6B1Q6IMI4 303 aa9.7□□□□□ -0.86
NECAP1-224ENST00000640099 LRRC7Q96NW7 1537 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 ANKRD45Q5TZF3 282 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 MCM10Q7L590 875 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 ZBTB40Q9NUA8 1239 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 MIS18AQ9NYP9 233 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 PNPLA6Q8IY17 1366 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 ADGRB2O60241 1585 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 RIMBP3CA6NJZ7 1639 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 RIMBP3BA6NNM3 1639 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 RIMBP3Q9UFD9 1639 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 VAMP4O75379 141 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 LTKP29376 864 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 NUTM2GQ5VZR2 741 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 USP35Q9P2H5 1018 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 KIF16BQ96L93 1317 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 DIP2BQ9P265 1576 aa9.69□□□□□ -0.86
NECAP1-224ENST00000640099 APBB1O00213 710 aa9.68□□□□□ -0.86
NECAP1-224ENST00000640099 CT47B1P0C2W7 299 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-224ENST00000640099 TWISTNBQ3B726 338 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-224ENST00000640099 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.68□□□□□ -0.86
NECAP1-224ENST00000640099 IL16Q14005 1332 aa9.68□□□□□ -0.86
NECAP1-224ENST00000640099 BECN1Q14457 450 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms