RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 PUS7Q96PZ0 661 aaKnown RBP11.48□□□□□ -0.57
PAX6-259ENST00000639916 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
PAX6-259ENST00000639916 NSD3Q9BZ95 1437 aa11.47□□□□□ -0.57
PAX6-259ENST00000639916 FAM161AQ3B820 660 aa11.46□□□□□ -0.57
PAX6-259ENST00000639916 ZMYM3Q14202 1370 aa11.46□□□□□ -0.57
PAX6-259ENST00000639916 SPATA31D1Q6ZQQ2 1576 aa11.46□□□□□ -0.57
PAX6-259ENST00000639916 UTP14CQ5TAP6 766 aaKnown RBP11.46□□□□□ -0.58
PAX6-259ENST00000639916 MORC1Q86VD1 984 aa11.46□□□□□ -0.58
PAX6-259ENST00000639916 PRAM1Q96QH2 718 aa11.46□□□□□ -0.58
PAX6-259ENST00000639916 PRDM10Q9NQV6 1147 aa11.46□□□□□ -0.58
PAX6-259ENST00000639916 TULP4Q9NRJ4 1543 aa11.46□□□□□ -0.58
PAX6-259ENST00000639916 YTHDC2Q9H6S0 1430 aaKnown RBP11.46□□□□□ -0.58
PAX6-259ENST00000639916 A2ML1A8K2U0 1454 aa11.45□□□□□ -0.58
PAX6-259ENST00000639916 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
PAX6-259ENST00000639916 MYH16Q9H6N6 1097 aa11.45□□□□□ -0.58
PAX6-259ENST00000639916 FAM13BQ9NYF5 915 aa11.45□□□□□ -0.58
PAX6-259ENST00000639916 NCLP19338 710 aaKnown RBP11.45□□□□□ -0.58
PAX6-259ENST00000639916 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
PAX6-259ENST00000639916 MRE11P49959 708 aa11.45□□□□□ -0.58
PAX6-259ENST00000639916 DMTNQ08495 405 aa11.45□□□□□ -0.58
PAX6-259ENST00000639916 MINK1Q8N4C8 1332 aaPredicted RBP11.45□□□□□ -0.58
PAX6-259ENST00000639916 DCAF8L1A6NGE4 600 aa11.44□□□□□ -0.58
PAX6-259ENST00000639916 TMEM51Q9NW97 253 aa11.44□□□□□ -0.58
PAX6-259ENST00000639916 RCAN3Q9UKA8 241 aa11.44□□□□□ -0.58
PAX6-259ENST00000639916 ALKQ9UM73 1620 aa11.44□□□□□ -0.58
PAX6-259ENST00000639916 GZF1Q9H116 711 aaPredicted RBP11.44□□□□□ -0.58
PAX6-259ENST00000639916 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
PAX6-259ENST00000639916 RIMS2Q9UQ26 1411 aa11.43□□□□□ -0.58
PAX6-259ENST00000639916 PTPRMP28827 1452 aa11.43□□□□□ -0.58
PAX6-259ENST00000639916 ANKRD36BQ8N2N9 1353 aa11.43□□□□□ -0.58
PAX6-259ENST00000639916 CCDC146Q8IYE0 955 aa11.42□□□□□ -0.58
PAX6-259ENST00000639916 SLKQ9H2G2 1235 aaPredicted RBP11.42□□□□□ -0.58
PAX6-259ENST00000639916 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
PAX6-259ENST00000639916 TRIM44Q96DX7 344 aaPredicted RBP11.41□□□□□ -0.58
PAX6-259ENST00000639916 TERF1P54274 439 aa11.41□□□□□ -0.58
PAX6-259ENST00000639916 ZNF830Q96NB3 372 aaPredicted RBP11.41□□□□□ -0.58
PAX6-259ENST00000639916 GRPEL1Q9HAV7 217 aa11.41□□□□□ -0.58
PAX6-259ENST00000639916 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
PAX6-259ENST00000639916 OFD1O75665 1012 aa11.4□□□□□ -0.58
PAX6-259ENST00000639916 ARID3AQ99856 593 aa11.4□□□□□ -0.58
PAX6-259ENST00000639916 POLR3AO14802 1390 aaPredicted RBP11.4□□□□□ -0.58
PAX6-259ENST00000639916 ZSCAN20P17040 1043 aaPredicted RBP11.4□□□□□ -0.58
PAX6-259ENST00000639916 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.4□□□□□ -0.58
PAX6-259ENST00000639916 ANTXR1Q9H6X2 564 aa11.4□□□□□ -0.58
PAX6-259ENST00000639916 APAF1O14727 1248 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 WAPLQ7Z5K2 1190 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 CDK19Q9BWU1 502 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 NINLQ9Y2I6 1382 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 ATAD2Q6PL18 1390 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 KDM2BQ8NHM5 1336 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 A0A1W2PP64 1363 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 TNRQ92752 1358 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 VGLL3A8MV65 326 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 MTHFSP49914 203 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
PAX6-259ENST00000639916 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 TERF2IPQ9NYB0 399 aa11.39□□□□□ -0.59
PAX6-259ENST00000639916 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
PAX6-259ENST00000639916 ZNF521Q96K83 1311 aa11.38□□□□□ -0.59
PAX6-259ENST00000639916 NSD2O96028 1365 aa11.37□□□□□ -0.59
PAX6-259ENST00000639916 CRBNQ96SW2 442 aa11.37□□□□□ -0.59
PAX6-259ENST00000639916 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.37□□□□□ -0.59
PAX6-259ENST00000639916 MTERF4Q7Z6M4 381 aaKnown RBP11.37□□□□□ -0.59
PAX6-259ENST00000639916 ABCC11Q96J66 1382 aa11.36□□□□□ -0.59
PAX6-259ENST00000639916 USP19O94966 1318 aa11.36□□□□□ -0.59
PAX6-259ENST00000639916 MCM4P33991 863 aa11.36□□□□□ -0.59
PAX6-259ENST00000639916 DUSP27Q5VZP5 1158 aa11.36□□□□□ -0.59
PAX6-259ENST00000639916 ANP32BQ92688 251 aaKnown RBP11.36□□□□□ -0.59
PAX6-259ENST00000639916 CFAP53Q96M91 514 aa11.36□□□□□ -0.59
PAX6-259ENST00000639916 CABP1Q9NZU7 370 aa11.36□□□□□ -0.59
PAX6-259ENST00000639916 METP08581 1390 aa11.36□□□□□ -0.59
PAX6-259ENST00000639916 PLIN1O60240 522 aa11.36□□□□□ -0.59
PAX6-259ENST00000639916 GGNBP2Q9H3C7 697 aa11.36□□□□□ -0.59
PAX6-259ENST00000639916 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
PAX6-259ENST00000639916 BECN1Q14457 450 aa11.35□□□□□ -0.59
PAX6-259ENST00000639916 HDGFL2Q7Z4V5 671 aaPredicted RBP11.35□□□□□ -0.59
PAX6-259ENST00000639916 SLFN5Q08AF3 891 aa11.35□□□□□ -0.59
PAX6-259ENST00000639916 TXNDC2Q86VQ3 553 aa11.35□□□□□ -0.59
PAX6-259ENST00000639916 FTSJ3Q8IY81 847 aaKnown RBP11.35□□□□□ -0.59
PAX6-259ENST00000639916 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
PAX6-259ENST00000639916 FYB1O15117 783 aa11.34□□□□□ -0.59
PAX6-259ENST00000639916 TRAK2O60296 914 aa11.34□□□□□ -0.59
PAX6-259ENST00000639916 KIF20AO95235 890 aa11.34□□□□□ -0.59
PAX6-259ENST00000639916 SETD1AO15047 1707 aaKnown RBP11.34□□□□□ -0.59
PAX6-259ENST00000639916 CENPQQ7L2Z9 268 aaPredicted RBP11.34□□□□□ -0.59
PAX6-259ENST00000639916 NGEFQ8N5V2 710 aa11.34□□□□□ -0.59
PAX6-259ENST00000639916 ISY1Q9ULR0 285 aaKnown RBP11.34□□□□□ -0.59
PAX6-259ENST00000639916 TMEM2Q9UHN6 1383 aa11.34□□□□□ -0.59
PAX6-259ENST00000639916 CD163L1Q9NR16 1453 aa11.34□□□□□ -0.59
PAX6-259ENST00000639916 NRXN3Q9Y4C0 1643 aa11.33□□□□□ -0.6
PAX6-259ENST00000639916 R3HCC1Q9Y3T6 440 aaKnown RBP11.33□□□□□ -0.6
PAX6-259ENST00000639916 ZSCAN30Q86W11 494 aa11.33□□□□□ -0.6
PAX6-259ENST00000639916 SPINK5Q9NQ38 1064 aaPredicted RBP11.33□□□□□ -0.6
PAX6-259ENST00000639916 UQCRHLA0A096LP55 91 aa11.32□□□□□ -0.6
PAX6-259ENST00000639916 UQCRHP07919 91 aa11.32□□□□□ -0.6
PAX6-259ENST00000639916 RUNDC1Q96C34 613 aa11.32□□□□□ -0.6
PAX6-259ENST00000639916 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
PAX6-259ENST00000639916 CCDC94Q9BW85 323 aaPredicted RBP11.32□□□□□ -0.6
PAX6-259ENST00000639916 SHPRHQ149N8 1683 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms