RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 CABP1Q9NZU7 370 aa24.45■■□□□ 1.5
CROCCP2-206ENST00000639594 U2SURPO15042 1029 aaKnown RBP24.44■■□□□ 1.5
CROCCP2-206ENST00000639594 IGHDP01880 384 aa24.44■■□□□ 1.5
CROCCP2-206ENST00000639594 DLC1Q96QB1 1528 aa24.44■■□□□ 1.5
CROCCP2-206ENST00000639594 PLEKHF1Q96S99 279 aa24.44■■□□□ 1.5
CROCCP2-206ENST00000639594 NBR1Q14596 966 aa24.43■■□□□ 1.5
CROCCP2-206ENST00000639594 WAPLQ7Z5K2 1190 aa24.43■■□□□ 1.5
CROCCP2-206ENST00000639594 RGS3P49796 1198 aa24.42■■□□□ 1.5
CROCCP2-206ENST00000639594 CLUAP1Q96AJ1 413 aa24.42■■□□□ 1.5
CROCCP2-206ENST00000639594 MYH16Q9H6N6 1097 aa24.42■■□□□ 1.5
CROCCP2-206ENST00000639594 RIMS1Q86UR5 1692 aaKnown RBP24.42■■□□□ 1.5
CROCCP2-206ENST00000639594 FAM161AQ3B820 660 aa24.4■■□□□ 1.5
CROCCP2-206ENST00000639594 C8orf34Q49A92 452 aa24.4■■□□□ 1.5
CROCCP2-206ENST00000639594 BCL2L13Q9BXK5 485 aa24.4■■□□□ 1.5
CROCCP2-206ENST00000639594 TNNQ9UQP3 1299 aa24.4■■□□□ 1.5
CROCCP2-206ENST00000639594 NRXN3Q9Y4C0 1643 aa24.4■■□□□ 1.5
CROCCP2-206ENST00000639594 TMPOP42166 694 aaKnown RBP24.39■■□□□ 1.49
CROCCP2-206ENST00000639594 RLBP1P12271 317 aa24.38■■□□□ 1.49
CROCCP2-206ENST00000639594 MAP2P11137 1827 aaKnown RBP24.38■■□□□ 1.49
CROCCP2-206ENST00000639594 VIRMAQ69YN4 1812 aaKnown RBP24.37■■□□□ 1.49
CROCCP2-206ENST00000639594 TMEM2Q9UHN6 1383 aa24.36■■□□□ 1.49
CROCCP2-206ENST00000639594 TRIM35Q9UPQ4 493 aa24.36■■□□□ 1.49
CROCCP2-206ENST00000639594 PNPLA6Q8IY17 1366 aa24.36■■□□□ 1.49
CROCCP2-206ENST00000639594 ADAMTSL3P82987 1691 aa24.35■■□□□ 1.49
CROCCP2-206ENST00000639594 DIAPH1O60610 1272 aaKnown RBP24.35■■□□□ 1.49
CROCCP2-206ENST00000639594 TSR2Q969E8 191 aaKnown RBP24.35■■□□□ 1.49
CROCCP2-206ENST00000639594 MAPK8IP3Q9UPT6 1336 aa24.35■■□□□ 1.49
CROCCP2-206ENST00000639594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.35■■□□□ 1.49
CROCCP2-206ENST00000639594 ATP7BP35670 1465 aa24.34■■□□□ 1.49
CROCCP2-206ENST00000639594 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.32■■□□□ 1.48
CROCCP2-206ENST00000639594 FBLN1P23142 703 aa24.32■■□□□ 1.48
CROCCP2-206ENST00000639594 DDRGK1Q96HY6 314 aa24.31■■□□□ 1.48
CROCCP2-206ENST00000639594 METP08581 1390 aa24.31■■□□□ 1.48
CROCCP2-206ENST00000639594 EXOSC9Q06265 439 aaKnown RBP24.3■■□□□ 1.48
CROCCP2-206ENST00000639594 LTKP29376 864 aa24.3■■□□□ 1.48
CROCCP2-206ENST00000639594 PCDHB15Q9Y5E8 787 aa24.3■■□□□ 1.48
CROCCP2-206ENST00000639594 CDC42BPGQ6DT37 1551 aa24.3■■□□□ 1.48
CROCCP2-206ENST00000639594 RIPK4P57078 832 aa24.29■■□□□ 1.48
CROCCP2-206ENST00000639594 AAMPQ13685 434 aa24.29■■□□□ 1.48
CROCCP2-206ENST00000639594 CT47B1P0C2W7 299 aaPredicted RBP24.29■■□□□ 1.48
CROCCP2-206ENST00000639594 KNDC1Q76NI1 1749 aa24.28■■□□□ 1.48
CROCCP2-206ENST00000639594 POLKQ9UBT6 870 aa24.28■■□□□ 1.48
CROCCP2-206ENST00000639594 LRRC7Q96NW7 1537 aa24.28■■□□□ 1.48
CROCCP2-206ENST00000639594 WASLO00401 505 aaPredicted RBP24.27■■□□□ 1.48
CROCCP2-206ENST00000639594 PMFBP1Q8TBY8 1022 aa24.27■■□□□ 1.48
CROCCP2-206ENST00000639594 TXNDC2Q86VQ3 553 aa24.27■■□□□ 1.48
CROCCP2-206ENST00000639594 PPM1GO15355 546 aaPredicted RBP24.26■■□□□ 1.47
CROCCP2-206ENST00000639594 ZKSCAN2Q63HK3 967 aa24.26■■□□□ 1.47
CROCCP2-206ENST00000639594 PNNQ9H307 717 aaKnown RBP24.26■■□□□ 1.47
CROCCP2-206ENST00000639594 IL16Q14005 1332 aa24.26■■□□□ 1.47
CROCCP2-206ENST00000639594 CPSF1Q10570 1443 aaKnown RBP24.26■■□□□ 1.47
CROCCP2-206ENST00000639594 PPIP5K1Q6PFW1 1433 aa24.26■■□□□ 1.47
CROCCP2-206ENST00000639594 HDGFP51858 240 aaKnown RBP24.25■■□□□ 1.47
CROCCP2-206ENST00000639594 LAS1LQ9Y4W2 734 aaKnown RBP24.25■■□□□ 1.47
CROCCP2-206ENST00000639594 FCHSD2O94868 740 aa24.24■■□□□ 1.47
CROCCP2-206ENST00000639594 MVPQ14764 893 aaKnown RBP24.24■■□□□ 1.47
CROCCP2-206ENST00000639594 SLIT1O75093 1534 aa24.24■■□□□ 1.47
CROCCP2-206ENST00000639594 SMC4Q9NTJ3 1288 aa24.23■■□□□ 1.47
CROCCP2-206ENST00000639594 EDC4Q6P2E9 1401 aaKnown RBP24.23■■□□□ 1.47
CROCCP2-206ENST00000639594 ARHGAP23Q9P227 1491 aa24.23■■□□□ 1.47
CROCCP2-206ENST00000639594 MON2Q7Z3U7 1717 aa24.23■■□□□ 1.47
CROCCP2-206ENST00000639594 DZIP1LQ8IYY4 767 aaKnown RBP24.23■■□□□ 1.47
CROCCP2-206ENST00000639594 DEKP35659 375 aaKnown RBP24.22■■□□□ 1.47
CROCCP2-206ENST00000639594 SSH1Q8WYL5 1049 aa24.22■■□□□ 1.47
CROCCP2-206ENST00000639594 RSPH6AQ9H0K4 717 aa24.22■■□□□ 1.47
CROCCP2-206ENST00000639594 ADAMTS13Q76LX8 1427 aa24.22■■□□□ 1.47
CROCCP2-206ENST00000639594 AKAP12Q02952 1782 aa24.22■■□□□ 1.47
CROCCP2-206ENST00000639594 FAM135BQ49AJ0 1406 aa24.22■■□□□ 1.47
CROCCP2-206ENST00000639594 CEP170BQ9Y4F5 1589 aaPredicted RBP24.22■■□□□ 1.47
CROCCP2-206ENST00000639594 PRKAR2BP31323 418 aa24.21■■□□□ 1.47
CROCCP2-206ENST00000639594 NME9Q86XW9 330 aa24.21■■□□□ 1.47
CROCCP2-206ENST00000639594 NCKAP5LQ9HCH0 1330 aa24.2■■□□□ 1.47
CROCCP2-206ENST00000639594 FTSJ3Q8IY81 847 aaKnown RBP24.2■■□□□ 1.47
CROCCP2-206ENST00000639594 NUDT16Q96DE0 195 aaKnown RBP24.2■■□□□ 1.47
CROCCP2-206ENST00000639594 ZRANB1Q9UGI0 708 aa24.2■■□□□ 1.47
CROCCP2-206ENST00000639594 ITSN1Q15811 1721 aa24.2■■□□□ 1.47
CROCCP2-206ENST00000639594 RTL5Q5HYW3 569 aaPredicted RBP24.2■■□□□ 1.46
CROCCP2-206ENST00000639594 PLEKHG1Q9ULL1 1385 aa24.19■■□□□ 1.46
CROCCP2-206ENST00000639594 EMILIN1Q9Y6C2 1016 aa24.19■■□□□ 1.46
CROCCP2-206ENST00000639594 CPS1P31327 1500 aa24.19■■□□□ 1.46
CROCCP2-206ENST00000639594 SLC4A3P48751 1232 aa24.19■■□□□ 1.46
CROCCP2-206ENST00000639594 TECPR2O15040 1411 aa24.18■■□□□ 1.46
CROCCP2-206ENST00000639594 TRIM27P14373 513 aa24.18■■□□□ 1.46
CROCCP2-206ENST00000639594 THEMISQ8N1K5 641 aaPredicted RBP24.18■■□□□ 1.46
CROCCP2-206ENST00000639594 SIRT1Q96EB6 747 aa24.18■■□□□ 1.46
CROCCP2-206ENST00000639594 RWDD1Q9H446 243 aaPredicted RBP24.18■■□□□ 1.46
CROCCP2-206ENST00000639594 HMOX1P09601 288 aa24.17■■□□□ 1.46
CROCCP2-206ENST00000639594 PDZRN3Q9UPQ7 1066 aa24.17■■□□□ 1.46
CROCCP2-206ENST00000639594 DLG5Q8TDM6 1919 aa24.16■■□□□ 1.46
CROCCP2-206ENST00000639594 PHACTR3Q96KR7 559 aa24.16■■□□□ 1.46
CROCCP2-206ENST00000639594 NOB1Q9ULX3 412 aaKnown RBP24.16■■□□□ 1.46
CROCCP2-206ENST00000639594 EID1Q9Y6B2 187 aa24.16■■□□□ 1.46
CROCCP2-206ENST00000639594 SETD1BQ9UPS6 1966 aaKnown RBP24.16■■□□□ 1.46
CROCCP2-206ENST00000639594 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
CROCCP2-206ENST00000639594 ATF7IPQ6VMQ6 1270 aa24.15■■□□□ 1.46
CROCCP2-206ENST00000639594 SLC26A8Q96RN1 970 aa24.15■■□□□ 1.46
CROCCP2-206ENST00000639594 CDK12Q9NYV4 1490 aaPredicted RBP24.14■■□□□ 1.45
CROCCP2-206ENST00000639594 NEFMP07197 916 aa24.14■■□□□ 1.45
CROCCP2-206ENST00000639594 IL13P35225 146 aa24.14■■□□□ 1.45
CROCCP2-206ENST00000639594 ZNF142P52746 1687 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms