RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 DIXDC1Q155Q3 683 aa11.54□□□□□ -0.56
SCARB2-217ENST00000639324 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
SCARB2-217ENST00000639324 F12P00748 615 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-217ENST00000639324 LIMD1Q9UGP4 676 aa11.53□□□□□ -0.56
SCARB2-217ENST00000639324 ZBTB3Q9H5J0 574 aa11.52□□□□□ -0.57
SCARB2-217ENST00000639324 SLC24A3Q9HC58 644 aa11.52□□□□□ -0.57
SCARB2-217ENST00000639324 MAP10Q9P2G4 905 aa11.52□□□□□ -0.57
SCARB2-217ENST00000639324 WFS1O76024 890 aa11.51□□□□□ -0.57
SCARB2-217ENST00000639324 BMP1P13497 986 aa11.51□□□□□ -0.57
SCARB2-217ENST00000639324 PRPF38BQ5VTL8 546 aaKnown RBP11.51□□□□□ -0.57
SCARB2-217ENST00000639324 MYSM1Q5VVJ2 828 aa11.51□□□□□ -0.57
SCARB2-217ENST00000639324 TRIM46Q7Z4K8 759 aa11.51□□□□□ -0.57
SCARB2-217ENST00000639324 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
SCARB2-217ENST00000639324 PER1O15534 1290 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-217ENST00000639324 QPCTQ16769 361 aa11.5□□□□□ -0.57
SCARB2-217ENST00000639324 WASF2Q9Y6W5 498 aa11.5□□□□□ -0.57
SCARB2-217ENST00000639324 CSPP1Q1MSJ5 1256 aa11.49□□□□□ -0.57
SCARB2-217ENST00000639324 VARSP26640 1264 aaKnown RBP11.48□□□□□ -0.57
SCARB2-217ENST00000639324 CTHP32929 405 aa11.48□□□□□ -0.57
SCARB2-217ENST00000639324 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
SCARB2-217ENST00000639324 CAPN5O15484 640 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-217ENST00000639324 MPNDQ8N594 471 aa11.47□□□□□ -0.57
SCARB2-217ENST00000639324 FOXJ1Q92949 421 aa11.47□□□□□ -0.57
SCARB2-217ENST00000639324 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
SCARB2-217ENST00000639324 LILRB3O75022 631 aa11.45□□□□□ -0.58
SCARB2-217ENST00000639324 TUSC1Q2TAM9 212 aa11.45□□□□□ -0.58
SCARB2-217ENST00000639324 C4orf48Q5BLP8 95 aa11.45□□□□□ -0.58
SCARB2-217ENST00000639324 TERTO14746 1132 aaKnown RBP11.44□□□□□ -0.58
SCARB2-217ENST00000639324 PRKCSHP14314 528 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-217ENST00000639324 NNTQ13423 1086 aa11.43□□□□□ -0.58
SCARB2-217ENST00000639324 RTL5Q5HYW3 569 aaPredicted RBP11.42□□□□□ -0.58
SCARB2-217ENST00000639324 KLF16Q9BXK1 252 aaPredicted RBP11.42□□□□□ -0.58
SCARB2-217ENST00000639324 WIPF1O43516 503 aa11.41□□□□□ -0.58
SCARB2-217ENST00000639324 TIMP2P16035 220 aa11.4□□□□□ -0.58
SCARB2-217ENST00000639324 CDK15Q96Q40 435 aa11.4□□□□□ -0.58
SCARB2-217ENST00000639324 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
SCARB2-217ENST00000639324 ADH1CP00326 375 aa11.39□□□□□ -0.59
SCARB2-217ENST00000639324 FAM174AQ8TBP5 190 aa11.39□□□□□ -0.59
SCARB2-217ENST00000639324 TSC1Q92574 1164 aa11.39□□□□□ -0.59
SCARB2-217ENST00000639324 NUTM2BA6NNL0 878 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-217ENST00000639324 NUTM2EB1AL46 878 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-217ENST00000639324 NUTM2DQ5VT03 806 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-217ENST00000639324 NUTM2AQ8IVF1 878 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-217ENST00000639324 ZFP42Q96MM3 310 aa11.38□□□□□ -0.59
SCARB2-217ENST00000639324 NR3C2P08235 984 aa11.37□□□□□ -0.59
SCARB2-217ENST00000639324 CLK2P49760 499 aaKnown RBP11.37□□□□□ -0.59
SCARB2-217ENST00000639324 FBXO31Q5XUX0 539 aaPredicted RBP11.37□□□□□ -0.59
SCARB2-217ENST00000639324 GRM5P41594 1212 aa11.36□□□□□ -0.59
SCARB2-217ENST00000639324 WDR4P57081 412 aaKnown RBP11.35□□□□□ -0.59
SCARB2-217ENST00000639324 SH3RF1Q7Z6J0 888 aa11.35□□□□□ -0.59
SCARB2-217ENST00000639324 POLR3EQ9NVU0 708 aa11.35□□□□□ -0.59
SCARB2-217ENST00000639324 ARID5BQ14865 1188 aa11.34□□□□□ -0.59
SCARB2-217ENST00000639324 NXF1Q9UBU9 619 aaKnown RBP11.34□□□□□ -0.59
SCARB2-217ENST00000639324 MRPL14Q6P1L8 145 aaKnown RBP11.33□□□□□ -0.6
SCARB2-217ENST00000639324 C1QTNF2Q9BXJ5 285 aa11.33□□□□□ -0.6
SCARB2-217ENST00000639324 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
SCARB2-217ENST00000639324 BPHLQ86WA6 291 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-217ENST00000639324 ITPKCQ96DU7 683 aa11.32□□□□□ -0.6
SCARB2-217ENST00000639324 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
SCARB2-217ENST00000639324 VEGFBP49765 207 aa11.31□□□□□ -0.6
SCARB2-217ENST00000639324 AGERQ15109 404 aa11.31□□□□□ -0.6
SCARB2-217ENST00000639324 PURBQ96QR8 312 aaKnown RBP11.31□□□□□ -0.6
SCARB2-217ENST00000639324 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
SCARB2-217ENST00000639324 HELBQ8NG08 1087 aaPredicted RBP11.3□□□□□ -0.6
SCARB2-217ENST00000639324 ZIC2O95409 532 aaPredicted RBP11.29□□□□□ -0.6
SCARB2-217ENST00000639324 NR5A1Q13285 461 aa11.29□□□□□ -0.6
SCARB2-217ENST00000639324 RSPH6AQ9H0K4 717 aa11.29□□□□□ -0.6
SCARB2-217ENST00000639324 GPBP1L1Q9HC44 474 aaPredicted RBP11.29□□□□□ -0.6
SCARB2-217ENST00000639324 SOBPA7XYQ1 873 aa11.28□□□□□ -0.6
SCARB2-217ENST00000639324 H3BM21 787 aa11.27□□□□□ -0.61
SCARB2-217ENST00000639324 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
SCARB2-217ENST00000639324 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
SCARB2-217ENST00000639324 CCDC180Q9P1Z9 1646 aa11.27□□□□□ -0.61
SCARB2-217ENST00000639324 GMPRP36959 345 aa11.26□□□□□ -0.61
SCARB2-217ENST00000639324 NBPF14Q5TI25 921 aa11.26□□□□□ -0.61
SCARB2-217ENST00000639324 NPAS3Q8IXF0 933 aa11.26□□□□□ -0.61
SCARB2-217ENST00000639324 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
SCARB2-217ENST00000639324 LORP23490 312 aaPredicted RBP11.25□□□□□ -0.61
SCARB2-217ENST00000639324 INSM1Q01101 510 aaPredicted RBP11.25□□□□□ -0.61
SCARB2-217ENST00000639324 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
SCARB2-217ENST00000639324 LRRN4Q8WUT4 740 aa11.25□□□□□ -0.61
SCARB2-217ENST00000639324 FAM117AQ9C073 453 aa11.25□□□□□ -0.61
SCARB2-217ENST00000639324 KDM4CQ9H3R0 1056 aa11.25□□□□□ -0.61
SCARB2-217ENST00000639324 MAP4K5Q9Y4K4 846 aa11.25□□□□□ -0.61
SCARB2-217ENST00000639324 FSHRP23945 695 aa11.24□□□□□ -0.61
SCARB2-217ENST00000639324 SCARF1Q14162 830 aa11.24□□□□□ -0.61
SCARB2-217ENST00000639324 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
SCARB2-217ENST00000639324 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCARB2-217ENST00000639324 STK17AQ9UEE5 414 aa11.24□□□□□ -0.61
SCARB2-217ENST00000639324 MAGEB6P1A0A0J9YX57 407 aa11.23□□□□□ -0.61
SCARB2-217ENST00000639324 SKIV2LQ15477 1246 aaKnown RBP11.23□□□□□ -0.61
SCARB2-217ENST00000639324 SH3D19Q5HYK7 790 aa11.23□□□□□ -0.61
SCARB2-217ENST00000639324 MEIOBQ8N635 442 aa11.22□□□□□ -0.61
SCARB2-217ENST00000639324 ERFEQ4G0M1 354 aa11.21□□□□□ -0.61
SCARB2-217ENST00000639324 C6orf118Q5T5N4 469 aa11.21□□□□□ -0.61
SCARB2-217ENST00000639324 CARD14Q9BXL6 1004 aa11.21□□□□□ -0.61
SCARB2-217ENST00000639324 PPP2R2DQ66LE6 453 aa11.2□□□□□ -0.62
SCARB2-217ENST00000639324 VASH1Q7L8A9 365 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-217ENST00000639324 GPKOWQ92917 476 aaPredicted RBP eCLIP11.2□□□□□ -0.62
SCARB2-217ENST00000639324 IRF7Q92985 503 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms