RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
NECAP1-216ENST00000639167 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.22
NECAP1-216ENST00000639167 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
NECAP1-216ENST00000639167 FBLN1P23142 703 aa13.65□□□□□ -0.22
NECAP1-216ENST00000639167 TMPOP42166 694 aaKnown RBP13.65□□□□□ -0.22
NECAP1-216ENST00000639167 SLC4A3P48751 1232 aa13.65□□□□□ -0.22
NECAP1-216ENST00000639167 DDRGK1Q96HY6 314 aa13.65□□□□□ -0.22
NECAP1-216ENST00000639167 ARHGEF40Q8TER5 1519 aa13.64□□□□□ -0.23
NECAP1-216ENST00000639167 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
NECAP1-216ENST00000639167 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
NECAP1-216ENST00000639167 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
NECAP1-216ENST00000639167 PCDHB15Q9Y5E8 787 aa13.64□□□□□ -0.23
NECAP1-216ENST00000639167 RIMS2Q9UQ26 1411 aa13.63□□□□□ -0.23
NECAP1-216ENST00000639167 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
NECAP1-216ENST00000639167 PPM1GO15355 546 aaPredicted RBP13.62□□□□□ -0.23
NECAP1-216ENST00000639167 DIAPH1O60610 1272 aaKnown RBP13.62□□□□□ -0.23
NECAP1-216ENST00000639167 ANKRD26Q9UPS8 1709 aa13.61□□□□□ -0.23
NECAP1-216ENST00000639167 MED14O60244 1454 aa13.61□□□□□ -0.23
NECAP1-216ENST00000639167 AGLP35573 1532 aa13.61□□□□□ -0.23
NECAP1-216ENST00000639167 RIPK4P57078 832 aa13.61□□□□□ -0.23
NECAP1-216ENST00000639167 PPP6R1Q9UPN7 881 aa13.61□□□□□ -0.23
NECAP1-216ENST00000639167 SMC4Q9NTJ3 1288 aa13.6□□□□□ -0.23
NECAP1-216ENST00000639167 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
NECAP1-216ENST00000639167 REREQ9P2R6 1566 aa13.6□□□□□ -0.23
NECAP1-216ENST00000639167 ZKSCAN2Q63HK3 967 aa13.59□□□□□ -0.23
NECAP1-216ENST00000639167 PMFBP1Q8TBY8 1022 aa13.59□□□□□ -0.23
NECAP1-216ENST00000639167 NEFMP07197 916 aa13.59□□□□□ -0.23
NECAP1-216ENST00000639167 HOMEZQ8IX15 550 aa13.59□□□□□ -0.23
NECAP1-216ENST00000639167 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.23
NECAP1-216ENST00000639167 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
NECAP1-216ENST00000639167 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
NECAP1-216ENST00000639167 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
NECAP1-216ENST00000639167 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.24
NECAP1-216ENST00000639167 MVPQ14764 893 aaKnown RBP13.58□□□□□ -0.24
NECAP1-216ENST00000639167 TXNDC2Q86VQ3 553 aa13.58□□□□□ -0.24
NECAP1-216ENST00000639167 DZIP1LQ8IYY4 767 aaKnown RBP13.58□□□□□ -0.24
NECAP1-216ENST00000639167 SSH1Q8WYL5 1049 aa13.58□□□□□ -0.24
NECAP1-216ENST00000639167 DLC1Q96QB1 1528 aa13.57□□□□□ -0.24
NECAP1-216ENST00000639167 METP08581 1390 aa13.57□□□□□ -0.24
NECAP1-216ENST00000639167 NCKAP5LQ9HCH0 1330 aa13.57□□□□□ -0.24
NECAP1-216ENST00000639167 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
NECAP1-216ENST00000639167 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
NECAP1-216ENST00000639167 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
NECAP1-216ENST00000639167 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
NECAP1-216ENST00000639167 SETD1AO15047 1707 aaKnown RBP13.56□□□□□ -0.24
NECAP1-216ENST00000639167 SEC24BO95487 1268 aa13.56□□□□□ -0.24
NECAP1-216ENST00000639167 HMOX1P09601 288 aa13.56□□□□□ -0.24
NECAP1-216ENST00000639167 CT47B1P0C2W7 299 aaPredicted RBP13.56□□□□□ -0.24
NECAP1-216ENST00000639167 NME9Q86XW9 330 aa13.56□□□□□ -0.24
NECAP1-216ENST00000639167 EMILIN1Q9Y6C2 1016 aa13.56□□□□□ -0.24
NECAP1-216ENST00000639167 WASLO00401 505 aaPredicted RBP13.55□□□□□ -0.24
NECAP1-216ENST00000639167 TRIM27P14373 513 aa13.55□□□□□ -0.24
NECAP1-216ENST00000639167 AAMPQ13685 434 aa13.55□□□□□ -0.24
NECAP1-216ENST00000639167 ATP7BP35670 1465 aa13.55□□□□□ -0.24
NECAP1-216ENST00000639167 PNNQ9H307 717 aaKnown RBP13.55□□□□□ -0.24
NECAP1-216ENST00000639167 RWDD1Q9H446 243 aaPredicted RBP13.55□□□□□ -0.24
NECAP1-216ENST00000639167 LRRC7Q96NW7 1537 aa13.55□□□□□ -0.24
NECAP1-216ENST00000639167 IL16Q14005 1332 aa13.54□□□□□ -0.24
NECAP1-216ENST00000639167 PPIP5K1Q6PFW1 1433 aa13.54□□□□□ -0.24
NECAP1-216ENST00000639167 FCHSD2O94868 740 aa13.54□□□□□ -0.24
NECAP1-216ENST00000639167 RSPH6AQ9H0K4 717 aa13.54□□□□□ -0.24
NECAP1-216ENST00000639167 NOB1Q9ULX3 412 aaKnown RBP13.54□□□□□ -0.24
NECAP1-216ENST00000639167 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
NECAP1-216ENST00000639167 NRXN3Q9Y4C0 1643 aa13.54□□□□□ -0.24
NECAP1-216ENST00000639167 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
NECAP1-216ENST00000639167 USP19O94966 1318 aa13.53□□□□□ -0.24
NECAP1-216ENST00000639167 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.53□□□□□ -0.24
NECAP1-216ENST00000639167 PHACTR3Q96KR7 559 aa13.53□□□□□ -0.24
NECAP1-216ENST00000639167 KCNA4P22459 653 aa13.52□□□□□ -0.24
NECAP1-216ENST00000639167 ATF7IPQ6VMQ6 1270 aa13.52□□□□□ -0.24
NECAP1-216ENST00000639167 KLHL34Q8N239 644 aa13.52□□□□□ -0.24
NECAP1-216ENST00000639167 NUDT16Q96DE0 195 aaKnown RBP13.52□□□□□ -0.24
NECAP1-216ENST00000639167 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
NECAP1-216ENST00000639167 THUMPD2Q9BTF0 503 aaKnown RBP13.52□□□□□ -0.25
NECAP1-216ENST00000639167 FAM135BQ49AJ0 1406 aa13.52□□□□□ -0.25
NECAP1-216ENST00000639167 TMEM57Q8N5G2 664 aa13.51□□□□□ -0.25
NECAP1-216ENST00000639167 CPSF1Q10570 1443 aaKnown RBP13.51□□□□□ -0.25
NECAP1-216ENST00000639167 MAP2P11137 1827 aaKnown RBP13.51□□□□□ -0.25
NECAP1-216ENST00000639167 VIRMAQ69YN4 1812 aaKnown RBP13.51□□□□□ -0.25
NECAP1-216ENST00000639167 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
NECAP1-216ENST00000639167 EDC4Q6P2E9 1401 aaKnown RBP13.51□□□□□ -0.25
NECAP1-216ENST00000639167 DDX19BQ9UMR2 479 aa13.5□□□□□ -0.25
NECAP1-216ENST00000639167 CDC42BPGQ6DT37 1551 aa13.5□□□□□ -0.25
NECAP1-216ENST00000639167 IL13P35225 146 aa13.49□□□□□ -0.25
NECAP1-216ENST00000639167 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
NECAP1-216ENST00000639167 USP35Q9P2H5 1018 aa13.49□□□□□ -0.25
NECAP1-216ENST00000639167 COG3Q96JB2 828 aa13.49□□□□□ -0.25
NECAP1-216ENST00000639167 CPS1P31327 1500 aa13.49□□□□□ -0.25
NECAP1-216ENST00000639167 TNRQ92752 1358 aa13.49□□□□□ -0.25
NECAP1-216ENST00000639167 NFKBIBQ15653 356 aa13.48□□□□□ -0.25
NECAP1-216ENST00000639167 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
NECAP1-216ENST00000639167 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
NECAP1-216ENST00000639167 KIF16BQ96L93 1317 aa13.48□□□□□ -0.25
NECAP1-216ENST00000639167 PRR36Q9H6K5 1346 aa13.48□□□□□ -0.25
NECAP1-216ENST00000639167 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
NECAP1-216ENST00000639167 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
NECAP1-216ENST00000639167 IPO8O15397 1037 aaKnown RBP13.47□□□□□ -0.25
NECAP1-216ENST00000639167 HDGFP51858 240 aaKnown RBP13.47□□□□□ -0.25
NECAP1-216ENST00000639167 ALDH1L2Q3SY69 923 aa13.47□□□□□ -0.25
NECAP1-216ENST00000639167 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms