RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 PPIP5K1Q6PFW1 1433 aa13.87□□□□□ -0.19
SPIN3-216ENST00000638940 TOPAZ1Q8N9V7 1692 aa13.86□□□□□ -0.19
SPIN3-216ENST00000638940 TCERG1O14776 1098 aaKnown RBP13.85□□□□□ -0.19
SPIN3-216ENST00000638940 PLEKHF1Q96S99 279 aa13.85□□□□□ -0.19
SPIN3-216ENST00000638940 AATKQ6ZMQ8 1374 aa13.85□□□□□ -0.19
SPIN3-216ENST00000638940 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
SPIN3-216ENST00000638940 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.19
SPIN3-216ENST00000638940 SENP3Q9H4L4 574 aaPredicted RBP13.85□□□□□ -0.19
SPIN3-216ENST00000638940 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
SPIN3-216ENST00000638940 MS4A1P11836 297 aa13.84□□□□□ -0.19
SPIN3-216ENST00000638940 CCDC61Q9Y6R9 512 aa13.84□□□□□ -0.19
SPIN3-216ENST00000638940 MAP2P11137 1827 aaKnown RBP13.84□□□□□ -0.19
SPIN3-216ENST00000638940 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-216ENST00000638940 PDE3AQ14432 1141 aa13.83□□□□□ -0.19
SPIN3-216ENST00000638940 TXNDC2Q86VQ3 553 aa13.83□□□□□ -0.19
SPIN3-216ENST00000638940 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.19
SPIN3-216ENST00000638940 CT47B1P0C2W7 299 aaPredicted RBP13.83□□□□□ -0.2
SPIN3-216ENST00000638940 NUDT16Q96DE0 195 aaKnown RBP13.83□□□□□ -0.2
SPIN3-216ENST00000638940 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
SPIN3-216ENST00000638940 IL16Q14005 1332 aa13.83□□□□□ -0.2
SPIN3-216ENST00000638940 C20orf194Q5TEA3 1177 aa13.83□□□□□ -0.2
SPIN3-216ENST00000638940 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
SPIN3-216ENST00000638940 NRKQ7Z2Y5 1582 aa13.82□□□□□ -0.2
SPIN3-216ENST00000638940 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
SPIN3-216ENST00000638940 EID1Q9Y6B2 187 aa13.82□□□□□ -0.2
SPIN3-216ENST00000638940 CDK12Q9NYV4 1490 aaPredicted RBP13.82□□□□□ -0.2
SPIN3-216ENST00000638940 KDM2BQ8NHM5 1336 aa13.82□□□□□ -0.2
SPIN3-216ENST00000638940 AAMPQ13685 434 aa13.82□□□□□ -0.2
SPIN3-216ENST00000638940 PTCH1Q13635 1447 aa13.81□□□□□ -0.2
SPIN3-216ENST00000638940 LTKP29376 864 aa13.81□□□□□ -0.2
SPIN3-216ENST00000638940 TBX22Q9Y458 520 aa13.81□□□□□ -0.2
SPIN3-216ENST00000638940 RIMS1Q86UR5 1692 aaKnown RBP13.8□□□□□ -0.2
SPIN3-216ENST00000638940 FCHSD2O94868 740 aa13.8□□□□□ -0.2
SPIN3-216ENST00000638940 CENPQQ7L2Z9 268 aaPredicted RBP13.8□□□□□ -0.2
SPIN3-216ENST00000638940 TMPOP42166 694 aaKnown RBP13.79□□□□□ -0.2
SPIN3-216ENST00000638940 POLKQ9UBT6 870 aa13.79□□□□□ -0.2
SPIN3-216ENST00000638940 MAPK8IP3Q9UPT6 1336 aa13.79□□□□□ -0.2
SPIN3-216ENST00000638940 RRP7AQ9Y3A4 280 aaKnown RBP13.79□□□□□ -0.2
SPIN3-216ENST00000638940 PTPRUQ92729 1446 aa13.79□□□□□ -0.2
SPIN3-216ENST00000638940 PLEKHG3A1L390 1219 aa13.78□□□□□ -0.2
SPIN3-216ENST00000638940 THEMISQ8N1K5 641 aaPredicted RBP13.78□□□□□ -0.2
SPIN3-216ENST00000638940 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
SPIN3-216ENST00000638940 BCAR3O75815 825 aa13.78□□□□□ -0.2
SPIN3-216ENST00000638940 RARSP54136 660 aaKnown RBP13.78□□□□□ -0.2
SPIN3-216ENST00000638940 LRRC7Q96NW7 1537 aa13.78□□□□□ -0.2
SPIN3-216ENST00000638940 U2SURPO15042 1029 aaKnown RBP13.77□□□□□ -0.2
SPIN3-216ENST00000638940 PRR36Q9H6K5 1346 aa13.77□□□□□ -0.2
SPIN3-216ENST00000638940 MSH5O43196 834 aa13.77□□□□□ -0.21
SPIN3-216ENST00000638940 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
SPIN3-216ENST00000638940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPIN3-216ENST00000638940 NALCNQ8IZF0 1738 aa13.77□□□□□ -0.21
SPIN3-216ENST00000638940 PIK3R4Q99570 1358 aa13.77□□□□□ -0.21
SPIN3-216ENST00000638940 CEBPAP49715 358 aaPredicted RBP13.76□□□□□ -0.21
SPIN3-216ENST00000638940 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
SPIN3-216ENST00000638940 COG3Q96JB2 828 aa13.76□□□□□ -0.21
SPIN3-216ENST00000638940 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
SPIN3-216ENST00000638940 CEP170BQ9Y4F5 1589 aaPredicted RBP13.74□□□□□ -0.21
SPIN3-216ENST00000638940 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
SPIN3-216ENST00000638940 NME9Q86XW9 330 aa13.74□□□□□ -0.21
SPIN3-216ENST00000638940 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
SPIN3-216ENST00000638940 IL13P35225 146 aa13.73□□□□□ -0.21
SPIN3-216ENST00000638940 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
SPIN3-216ENST00000638940 USP6P35125 1406 aa13.73□□□□□ -0.21
SPIN3-216ENST00000638940 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
SPIN3-216ENST00000638940 NEFMP07197 916 aa13.72□□□□□ -0.21
SPIN3-216ENST00000638940 RIPK4P57078 832 aa13.72□□□□□ -0.21
SPIN3-216ENST00000638940 AMOTL2Q9Y2J4 779 aa13.72□□□□□ -0.21
SPIN3-216ENST00000638940 TTC21BQ7Z4L5 1316 aa13.72□□□□□ -0.21
SPIN3-216ENST00000638940 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
SPIN3-216ENST00000638940 USP31Q70CQ4 1352 aa13.71□□□□□ -0.21
SPIN3-216ENST00000638940 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.21
SPIN3-216ENST00000638940 BACH2Q9BYV9 841 aa13.71□□□□□ -0.21
SPIN3-216ENST00000638940 TTC21AQ8NDW8 1320 aa13.71□□□□□ -0.22
SPIN3-216ENST00000638940 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.22
SPIN3-216ENST00000638940 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.22
SPIN3-216ENST00000638940 USP54Q70EL1 1684 aa13.7□□□□□ -0.22
SPIN3-216ENST00000638940 ACEP12821 1306 aa13.7□□□□□ -0.22
SPIN3-216ENST00000638940 PDE4AP27815 886 aa13.7□□□□□ -0.22
SPIN3-216ENST00000638940 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
SPIN3-216ENST00000638940 CLUAP1Q96AJ1 413 aa13.7□□□□□ -0.22
SPIN3-216ENST00000638940 ZNF428Q96B54 188 aa13.7□□□□□ -0.22
SPIN3-216ENST00000638940 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
SPIN3-216ENST00000638940 NCKAP5LQ9HCH0 1330 aa13.69□□□□□ -0.22
SPIN3-216ENST00000638940 ADAMTSL3P82987 1691 aa13.69□□□□□ -0.22
SPIN3-216ENST00000638940 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
SPIN3-216ENST00000638940 EMILIN1Q9Y6C2 1016 aa13.69□□□□□ -0.22
SPIN3-216ENST00000638940 FMN2Q9NZ56 1722 aa13.69□□□□□ -0.22
SPIN3-216ENST00000638940 RGPD1P0DJD0 1748 aa13.68□□□□□ -0.22
SPIN3-216ENST00000638940 DLG5Q8TDM6 1919 aa13.68□□□□□ -0.22
SPIN3-216ENST00000638940 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
SPIN3-216ENST00000638940 ANP32AP39687 249 aaKnown RBP13.67□□□□□ -0.22
SPIN3-216ENST00000638940 LMOD3Q0VAK6 560 aa13.67□□□□□ -0.22
SPIN3-216ENST00000638940 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
SPIN3-216ENST00000638940 ZRANB1Q9UGI0 708 aa13.67□□□□□ -0.22
SPIN3-216ENST00000638940 BRPF1P55201 1214 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-216ENST00000638940 EXOSC9Q06265 439 aaKnown RBP13.67□□□□□ -0.22
SPIN3-216ENST00000638940 ALDH1L2Q3SY69 923 aa13.67□□□□□ -0.22
SPIN3-216ENST00000638940 PANK1Q8TE04 598 aa13.66□□□□□ -0.22
SPIN3-216ENST00000638940 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
SPIN3-216ENST00000638940 PPM1GO15355 546 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms