RNA–Protein interactions for RNA: ENST00000638799.1

RTTN-213, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,943 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-213ENST00000638799 CCDC61Q9Y6R9 512 aa9.72□□□□□ -0.85
RTTN-213ENST00000638799 NME9Q86XW9 330 aa9.71□□□□□ -0.86
RTTN-213ENST00000638799 CFAP53Q96M91 514 aa9.71□□□□□ -0.86
RTTN-213ENST00000638799 DUSP27Q5VZP5 1158 aa9.71□□□□□ -0.86
RTTN-213ENST00000638799 RRP7AQ9Y3A4 280 aaKnown RBP9.71□□□□□ -0.86
RTTN-213ENST00000638799 PPP4R2Q9NY27 417 aa9.7□□□□□ -0.86
RTTN-213ENST00000638799 CDC42BPGQ6DT37 1551 aa9.7□□□□□ -0.86
RTTN-213ENST00000638799 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
RTTN-213ENST00000638799 ERICH6BQ5W0A0 696 aa9.7□□□□□ -0.86
RTTN-213ENST00000638799 B4GALNT3Q6L9W6 998 aa9.7□□□□□ -0.86
RTTN-213ENST00000638799 ADGRB2O60241 1585 aa9.7□□□□□ -0.86
RTTN-213ENST00000638799 RRP1P56182 461 aaKnown RBP9.7□□□□□ -0.86
RTTN-213ENST00000638799 NEUROD2Q15784 382 aa9.7□□□□□ -0.86
RTTN-213ENST00000638799 COL3A1P02461 1466 aaPredicted RBP9.7□□□□□ -0.86
RTTN-213ENST00000638799 EDC4Q6P2E9 1401 aaKnown RBP9.69□□□□□ -0.86
RTTN-213ENST00000638799 U2AF1L5P0DN76 240 aaPredicted RBP9.69□□□□□ -0.86
RTTN-213ENST00000638799 U2AF1Q01081 240 aaKnown RBP eCLIP9.69□□□□□ -0.86
RTTN-213ENST00000638799 KCNA6P17658 529 aa9.69□□□□□ -0.86
RTTN-213ENST00000638799 SLFN5Q08AF3 891 aa9.69□□□□□ -0.86
RTTN-213ENST00000638799 TCP11L2Q8N4U5 519 aa9.69□□□□□ -0.86
RTTN-213ENST00000638799 ZBTB47Q9UFB7 747 aaPredicted RBP9.69□□□□□ -0.86
RTTN-213ENST00000638799 RUNDC1Q96C34 613 aa9.68□□□□□ -0.86
RTTN-213ENST00000638799 NKTRP30414 1462 aaKnown RBP9.68□□□□□ -0.86
RTTN-213ENST00000638799 MON2Q7Z3U7 1717 aa9.68□□□□□ -0.86
RTTN-213ENST00000638799 PLIN1O60240 522 aa9.68□□□□□ -0.86
RTTN-213ENST00000638799 AKAP12Q02952 1782 aa9.68□□□□□ -0.86
RTTN-213ENST00000638799 DIP2AQ14689 1571 aa9.68□□□□□ -0.86
RTTN-213ENST00000638799 U2SURPO15042 1029 aaKnown RBP9.68□□□□□ -0.86
RTTN-213ENST00000638799 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
RTTN-213ENST00000638799 POLKQ9UBT6 870 aa9.68□□□□□ -0.86
RTTN-213ENST00000638799 XRN1Q8IZH2 1706 aaKnown RBP9.68□□□□□ -0.86
RTTN-213ENST00000638799 PTCH1Q13635 1447 aa9.68□□□□□ -0.86
RTTN-213ENST00000638799 ACEP12821 1306 aa9.67□□□□□ -0.86
RTTN-213ENST00000638799 WWC1Q8IX03 1113 aa9.67□□□□□ -0.86
RTTN-213ENST00000638799 TRMT2AQ8IZ69 625 aaKnown RBP9.67□□□□□ -0.86
RTTN-213ENST00000638799 IQSEC2Q5JU85 1478 aa9.67□□□□□ -0.86
RTTN-213ENST00000638799 ZNF142P52746 1687 aaPredicted RBP9.67□□□□□ -0.86
RTTN-213ENST00000638799 TOPAZ1Q8N9V7 1692 aa9.67□□□□□ -0.86
RTTN-213ENST00000638799 ANKLE2Q86XL3 938 aa9.67□□□□□ -0.86
RTTN-213ENST00000638799 ITSN1Q15811 1721 aa9.67□□□□□ -0.86
RTTN-213ENST00000638799 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
RTTN-213ENST00000638799 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
RTTN-213ENST00000638799 PNPLA6Q8IY17 1366 aa9.66□□□□□ -0.86
RTTN-213ENST00000638799 MAP2P11137 1827 aaKnown RBP9.66□□□□□ -0.86
RTTN-213ENST00000638799 PMFBP1Q8TBY8 1022 aa9.66□□□□□ -0.86
RTTN-213ENST00000638799 RGPD8O14715 1765 aaPredicted RBP9.66□□□□□ -0.86
RTTN-213ENST00000638799 SETD1BQ9UPS6 1966 aaKnown RBP9.66□□□□□ -0.86
RTTN-213ENST00000638799 PLEKHG3A1L390 1219 aa9.65□□□□□ -0.86
RTTN-213ENST00000638799 EXOC6Q8TAG9 804 aa9.65□□□□□ -0.86
RTTN-213ENST00000638799 ZNF692Q9BU19 519 aaPredicted RBP9.65□□□□□ -0.86
RTTN-213ENST00000638799 DIAPH1O60610 1272 aaKnown RBP9.65□□□□□ -0.86
RTTN-213ENST00000638799 RRS1Q15050 365 aaKnown RBP9.65□□□□□ -0.86
RTTN-213ENST00000638799 PLEKHF1Q96S99 279 aa9.65□□□□□ -0.86
RTTN-213ENST00000638799 COG3Q96JB2 828 aa9.64□□□□□ -0.87
RTTN-213ENST00000638799 PHF23Q9BUL5 403 aaPredicted RBP9.64□□□□□ -0.87
RTTN-213ENST00000638799 TTC21BQ7Z4L5 1316 aa9.64□□□□□ -0.87
RTTN-213ENST00000638799 NRKQ7Z2Y5 1582 aa9.64□□□□□ -0.87
RTTN-213ENST00000638799 E9PSI1 815 aa9.63□□□□□ -0.87
RTTN-213ENST00000638799 C20orf194Q5TEA3 1177 aa9.63□□□□□ -0.87
RTTN-213ENST00000638799 USP6P35125 1406 aa9.63□□□□□ -0.87
RTTN-213ENST00000638799 NGEFQ8N5V2 710 aa9.63□□□□□ -0.87
RTTN-213ENST00000638799 NOP58Q9Y2X3 529 aaKnown RBP9.63□□□□□ -0.87
RTTN-213ENST00000638799 CHD2O14647 1828 aaKnown RBP9.63□□□□□ -0.87
RTTN-213ENST00000638799 PIK3R4Q99570 1358 aa9.63□□□□□ -0.87
RTTN-213ENST00000638799 LAS1LQ9Y4W2 734 aaKnown RBP9.63□□□□□ -0.87
RTTN-213ENST00000638799 SSH2Q76I76 1423 aa9.61□□□□□ -0.87
RTTN-213ENST00000638799 HMOX1P09601 288 aa9.61□□□□□ -0.87
RTTN-213ENST00000638799 AATKQ6ZMQ8 1374 aa9.61□□□□□ -0.87
RTTN-213ENST00000638799 BCAR3O75815 825 aa9.61□□□□□ -0.87
RTTN-213ENST00000638799 TMPOP42166 694 aaKnown RBP9.61□□□□□ -0.87
RTTN-213ENST00000638799 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
RTTN-213ENST00000638799 SOX12O15370 315 aa9.61□□□□□ -0.87
RTTN-213ENST00000638799 IL13P35225 146 aa9.61□□□□□ -0.87
RTTN-213ENST00000638799 CCDC27Q2M243 656 aa9.61□□□□□ -0.87
RTTN-213ENST00000638799 TRIM35Q9UPQ4 493 aa9.61□□□□□ -0.87
RTTN-213ENST00000638799 NALCNQ8IZF0 1738 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 OVOS2A0A0J9YW53 1432 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 NPHP4O75161 1426 aaPredicted RBP9.6□□□□□ -0.87
RTTN-213ENST00000638799 OVOS2Q6IE36 1432 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 CRBNQ96SW2 442 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 RSPH6AQ9H0K4 717 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 LRRC7Q96NW7 1537 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 WDR63Q8IWG1 891 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 FMN2Q9NZ56 1722 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 PHACTR3Q96KR7 559 aa9.6□□□□□ -0.87
RTTN-213ENST00000638799 CDK12Q9NYV4 1490 aaPredicted RBP9.59□□□□□ -0.87
RTTN-213ENST00000638799 MAPK8IP3Q9UPT6 1336 aa9.59□□□□□ -0.87
RTTN-213ENST00000638799 ARXQ96QS3 562 aa9.59□□□□□ -0.87
RTTN-213ENST00000638799 MSH5O43196 834 aa9.59□□□□□ -0.87
RTTN-213ENST00000638799 FCHSD2O94868 740 aa9.59□□□□□ -0.87
RTTN-213ENST00000638799 RIPK4P57078 832 aa9.58□□□□□ -0.88
RTTN-213ENST00000638799 ANKARQ7Z5J8 1434 aa9.58□□□□□ -0.88
RTTN-213ENST00000638799 NUTM2GQ5VZR2 741 aa9.58□□□□□ -0.88
RTTN-213ENST00000638799 TSR2Q969E8 191 aaKnown RBP9.58□□□□□ -0.88
RTTN-213ENST00000638799 PEAK1Q9H792 1746 aa9.57□□□□□ -0.88
RTTN-213ENST00000638799 PIK3C2AO00443 1686 aa9.57□□□□□ -0.88
RTTN-213ENST00000638799 NCBP3Q53F19 620 aaKnown RBP9.57□□□□□ -0.88
RTTN-213ENST00000638799 HSP90AB2PQ58FF8 381 aa9.57□□□□□ -0.88
RTTN-213ENST00000638799 USP31Q70CQ4 1352 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms